KEGG   Salpingoeca rosetta: PTSG_04876
Entry
PTSG_04876        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K03538  ribonuclease P protein subunit POP4 [EC:3.1.26.5]
Organism
sre  Salpingoeca rosetta
Pathway
sre03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PTSG_04876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sre03009]
    PTSG_04876
   03016 Transfer RNA biogenesis [BR:sre03016]
    PTSG_04876
   03029 Mitochondrial biogenesis [BR:sre03029]
    PTSG_04876
Enzymes [BR:sre01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     PTSG_04876
Ribosome biogenesis [BR:sre03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     PTSG_04876
Transfer RNA biogenesis [BR:sre03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    PTSG_04876
Mitochondrial biogenesis [BR:sre03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    PTSG_04876
SSDB
Motif
Pfam: RNase_P-MRP_p29 EF-hand_1 EF-hand_7 EF-hand_6 EF-hand_8 EF-hand_5 EF-hand_9 EFhand_Ca_insen EF-hand_4
Other DBs
NCBI-GeneID: 16074773
NCBI-ProteinID: XP_004994193
UniProt: F2U8V9
Position
Unknown
AA seq 348 aa
MGGRGGSGRRRDGGGDRDGRRQRLAADNEEDLYRKLPKIVESKLELPPTQAALQDEVRTL
MEDLVSATESRAEAVVRSKLEAKVLLLDNVMDAKKPAFGEDDAETTPQHLQHTRKTKPKQ
GFFELEPEARKYANFEPLHALWKQYMQQILKYDDDRSTPDGMGQALVKADFHGCCITVVK
SRRPGLIGQAGIVIQETENTFRIINRANTIKVLPKCDSIFSFELGKYTFTIFGNHFRLKP
VDRAARKFKAKASIELLVDLDEFISIVEHLSRSEVDIRREIMQGFKHFDRDGKGYITMDD
LVKLCKAVDEYIPREELREMFVLADLDGKGKVTKDEFIKIMLKTNLFR
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgggtggcagaggtggcagtggtcgtcgccgcgatggtggcggtgatcgcgatggacgt
cggcagcggctggctgcagacaacgaagaagacttgtacaggaagctgcccaagatcgtt
gagtcaaaactcgagttgcctccaacacaagcagctttgcaggatgaagtcagaacgctg
atggaagacctcgtgagcgcaacagagtctagagcggaagcagtcgtcagatcaaaactg
gaagcaaaggtgctattgctggacaatgtgatggatgcgaagaaaccggcatttggcgaa
gacgacgcagagaccacaccacagcaccttcagcacacgcggaagacaaagccgaagcaa
gggttctttgagcttgagccagaagcacgaaagtacgccaactttgaaccgttgcacgcg
ctgtggaaacagtacatgcaacagattctcaagtacgacgatgataggtcaacgcctgat
ggcatgggccaagcgctcgtgaaagcagatttccacgggtgctgcatcacagttgtcaag
tcacgccgcccaggcttgattggccaggccggcattgtcatccaggaaacggagaacaca
ttccgcatcatcaacagagcaaacaccatcaaagtgctgcccaagtgcgacagcatattc
tcctttgaactgggcaagtacacattcaccatcttcggaaaccacttcagattgaaaccc
gttgatcgcgctgcgcgcaagttcaaagcaaaggcctccattgagttgctcgtggacttg
gacgagttcatcagtatcgtcgagcacctgtcacgttcagaggtcgacattcgccgagaa
attatgcagggcttcaaacactttgatcgggatggaaagggctacatcaccatggatgac
ttggttaagctgtgcaaagcggtggacgagtacattccacgcgaagagctgcgagagatg
tttgtgctggcggacttggatgggaagggcaaggtcaccaaggatgagtttatcaagatc
atgctcaagacaaacctcttccgataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (24)   

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