KEGG   Salpingoeca rosetta: PTSG_05004
Entry
PTSG_05004        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K24070  poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
Organism
sre  Salpingoeca rosetta
Pathway
sre03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PTSG_05004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sre03032]
    PTSG_05004
   03036 Chromosome and associated proteins [BR:sre03036]
    PTSG_05004
   03400 DNA repair and recombination proteins [BR:sre03400]
    PTSG_05004
Enzymes [BR:sre01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.2  Pentosyltransferases
    2.4.2.30  NAD+ ADP-ribosyltransferase
     PTSG_05004
DNA replication proteins [BR:sre03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    PTSG_05004
Chromosome and associated proteins [BR:sre03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    PTSG_05004
DNA repair and recombination proteins [BR:sre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     PTSG_05004
SSDB
Motif
Pfam: PARP PARP_reg zf-PARP PADR1_N PADR1_Zn_ribbon WGR BRCT BRCT_2
Other DBs
NCBI-GeneID: 16074897
NCBI-ProteinID: XP_004994319
UniProt: F2U985
Position
Unknown
AA seq 1057 aa
MEYKTINVRVGLCCHDDGIDKSAFDGLQPNYYHFSCFFKTGSRPSSTTDIEGFELLRLED
QKKIKDKLAKAAAGGSGDASSDNADLTMEYAKSSRAACRKCEEKINKGELRLGVLMDPPA
EASFRGKVPWWYHRRCFIGALSAHKDIALASLAPEQFKNHKRISADDLADVRSLFDAARK
AAGVKAASAPASSVGKGKGKKGGKRSASSAKKEAEDEDEEAPPPSKTAKGRGRKTAQTRG
KATATRVKEEAEKEDEEEEDGAESEEERKFQQQVKLIWKHKDNLSALSTTAIKDALMEND
RPTHGGRQKLLDRLVDGLLFGQLQPCSKCGENRWKYTSSGYECRGHISEWEPCTVVTRDP
PRSPWIVTEEIRDLDAYEKFKFKKNKRLFHPAHVRAREEATTKAAAMDDDDGDDDGNDDG
GADDEQDTGPLSGLFIAIAGRLSQSQPAIKKRITALGGNVHTGAVGSVVTCVLSSDAEVE
KETNKKIKDAINFGVPIVSLDFLDDCEKQHKCALLEPHVIKCTSTIIEPSKEKEHVSRLK
KKHRAKSGGAMMDMTLDTEQKKTVVVKGRAAVEDPDLALTHHVLEEGKRVWNASLARTDL
KRNTNTYYKIQVLVPDAGGPRARACLYRAWGRLGTTQGGTRIEHMSVSAAKSEFQRHFSE
KTGGNDFLSGKYFKVPNALYPLDITYDDVATSTVAKGSKTSLARPVAELIELIFDVSRMK
STMKELEVDLTRMPLGKLSRSQLNAAMEVLTELQNIIQDTALSTDDKRGRLLGCSNKFYT
YIPHDFGFKSPPPISTEKMIKDKVQMVEDLMNLEVASRILEDTAGTAGEDPLDVYYRKLK
TDITAVDKDSEEFKMLKTYVKNTHAKTHRQYDLEVVEAFKIGRHGEAERYEKKYGSLHNK
RLLWHGSRLTNYVGILSEGLRIAPPSAPVTGYMFGKGIYLADMVSKSANYCFCTSANNTG
LVLLCEAALGNMYERKHAEFVKKLPKGKHSTFGMGKTRPDPKQTITIDGGVQVPLGVGKP
SGVANTSLLYNEFIVYDVSQVHMRYLLRLDFKFKSGR
NT seq 3174 nt   +upstreamnt  +downstreamnt
atggagtataaaactataaatgtccgcgtgggattgtgctgtcacgacgatggcattgac
aagtctgcgtttgatggactgcaacccaactactaccacttcagctgcttcttcaagacg
ggcagccggccgagcagcaccacagacatcgaaggctttgaacttcttcgcctcgaggac
cagaagaagatcaaagacaagctggccaaggcggctgcaggcggcagtggtgatgccagc
agcgacaacgcagacttgaccatggaatacgccaagagctccagggctgcgtgtcgcaag
tgcgaggagaagatcaacaagggagaacttcgcctcggtgttctcatggacccgccagca
gaggcgagctttcgcgggaaagtgccgtggtggtaccaccgccgctgcttcatcggcgcc
ctctctgcccacaaggacatcgccctcgcctccctcgcaccagagcagttcaagaaccac
aaacgcatcagcgctgacgaccttgccgacgtgcgctcgctcttcgacgctgcacgcaag
gcggcaggcgtgaaggcagcatccgcccccgccagcagcgttggcaaggggaagggaaag
aagggaggaaagcgttcggcgtcctctgcgaagaaggaggcggaggatgaggatgaggag
gcaccaccaccaagcaagacagcaaaggggcggggacgaaagactgcacagacgagaggc
aaggcaacagcgacacgtgtgaaagaggaagcagagaaagaagatgaagaagaagaggat
ggtgctgagagcgaagaagagcgcaagtttcagcagcaagtgaaactcatttggaaacac
aaggataacttgtccgcgctgtccacgacggcaatcaaggatgcgctgatggagaatgat
cgcccaacccatggaggaaggcaaaagctgctggatcggcttgtggacgggctgctgttt
ggacagctgcagccctgcagcaagtgcggcgagaacagatggaagtacacgtccagcggc
tacgagtgccgcggacacatcagcgagtgggaaccgtgcactgttgtcacccgcgacccg
ccacgctcgccatggattgtcacggaggagattcgcgatttggacgcatatgaaaagttc
aagttcaagaaaaacaagcggctgtttcatcctgcacacgtgcgcgcacgagaggaggcc
acgacgaaggcggcggccatggatgacgatgatggtgacgatgacggcaatgatgacggt
ggtgctgatgacgaacaagacacgggcccactgtcgggcctcttcatcgccattgccggt
cgtctgtcgcaatcgcaacccgccatcaagaaacgcatcacggcgctcggtggcaacgtg
cacacgggcgctgttggcagcgtcgtcacgtgtgttctctcgtccgatgccgaggtggag
aaggagacgaacaagaagatcaaggatgcaattaactttggtgttccaattgtttctctg
gactttctcgacgactgcgagaagcaacacaagtgtgcactgcttgaaccgcatgtcatc
aagtgcacgtccaccatcatcgaaccgagcaaggagaaggagcacgtgtcacggctgaag
aagaaacaccgcgccaagagcggcggcgccatgatggacatgaccctggataccgagcag
aagaaaaccgtcgtggtgaagggtcgcgctgctgtagaggatcctgatctcgcactcacg
caccacgtcctcgaagaaggcaagcgcgtttggaatgcgtccctcgcccgcaccgatctc
aagcgcaacacgaacacctactacaagatccaggtcctggtcccggatgctggcggtccg
cgtgcgcgtgcgtgtctgtatcgcgcatgggggcgactcggcacaacacagggcggcaca
cgcatcgaacacatgtccgtttctgcagccaagagcgaattccagcgacacttctcagag
aagacgggtggaaacgattttctgtccggaaaatacttcaaagttcccaatgcgctctat
cctctcgacatcacttacgacgacgtcgcaacatcgacggtggcaaagggctccaaaaca
tcgctcgcccggcccgtcgccgaactcattgaactcatcttcgacgtttcgcgcatgaag
tccacaatgaaggagttggaagtcgacttgactcggatgccgctggggaagctgtcgcgc
tcgcagttgaatgcggcaatggaggtgctgacggaactgcagaacatcatccaggacacc
gccctctccacagacgacaagcggggacgccttcttggatgcagcaacaagttttacaca
tacatcccgcatgactttggcttcaagtcgccgccgcccatcagcacggagaagatgatc
aaggacaaagtgcagatggtggaggacctcatgaacctcgaagtcgcctcacgcatccta
gaggacacggcggggacggctggtgaggacccactggatgtgtactatcggaagctgaag
accgacatcaccgccgtcgacaaggacagcgaggagttcaagatgctcaagacatatgtg
aagaacacacacgcgaagacgcatcgccagtatgacctcgaagtcgttgaggcgttcaag
attggtcgtcacggtgaagcagagcgctatgagaagaaatacgggtctctccacaacaag
cgcttgctttggcatgggtctcgcctcaccaactacgtcggcattctctccgagggcctg
cgcatcgccccgcccagcgctcccgtcacgggttacatgtttggcaaaggcatttatctc
gccgacatggtgtctaagtccgccaactactgcttctgcacctccgccaacaacacgggc
cttgtgctgctgtgtgaagcggcgctgggaaacatgtatgagcggaagcacgctgagttt
gtgaagaaactgccgaaaggaaagcactccacgtttggcatgggaaagacgcggccggat
cccaagcagacaatcacaatcgacggcggtgtgcaagtgcctctgggcgttggaaaacca
agcggagtcgccaacaccagcctcctctacaacgaattcattgtgtacgacgtgtcgcag
gtgcacatgcgctatctcctccggctcgacttcaagttcaagagcggccgctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system