KEGG   Salpingoeca rosetta: PTSG_05820
Entry
PTSG_05820        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K03506  DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
Organism
sre  Salpingoeca rosetta
Pathway
sre03030  DNA replication
sre03410  Base excision repair
sre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PTSG_05820
   03410 Base excision repair
    PTSG_05820
   03420 Nucleotide excision repair
    PTSG_05820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sre03032]
    PTSG_05820
   03400 DNA repair and recombination proteins [BR:sre03400]
    PTSG_05820
Enzymes [BR:sre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PTSG_05820
DNA replication proteins [BR:sre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    PTSG_05820
DNA repair and recombination proteins [BR:sre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      PTSG_05820
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone
Other DBs
NCBI-GeneID: 16073284
NCBI-ProteinID: XP_004992713
UniProt: F2UCW1
Position
Unknown
AA seq 180 aa
MDDRLTQLPVSRIKAAMRKDPDVQLVAPEAAVLIAKATELFIAHMARCSFDRAQQVAPRR
KTVQTKDIEHVLESKEEFLFLEGIQLWTKKNSGGSIRRHAAPKHTTNDDNDDSDDDNDNE
DSSATVIAMDEDEGDEATGDAEMDTSVDEGALDGVERALNGDIEEGSEDEDDDEEEHEEE
NT seq 543 nt   +upstreamnt  +downstreamnt
atggatgacaggttgacgcagctgcctgtgagccgcatcaaagcggccatgcgcaaggac
ccggacgtgcagctcgtcgcaccagaggctgcggtgctcatcgcaaaagcaacagagctg
ttcatcgcgcacatggcgcgctgcagcttcgaccgtgcacagcaagtcgcaccgaggcga
aaaacagtgcaaaccaaggacattgaacacgtcctggagtcgaaggaagagtttctgttt
cttgaaggcattcagctttggacaaagaagaacagcggcgggtcgattcggcggcacgcc
gcgcccaaacacaccaccaacgacgacaacgatgacagcgatgatgacaacgacaatgag
gacagcagtgccactgtcattgcgatggacgaggatgagggtgatgaagcgactggcgac
gcagagatggacacgagtgttgatgagggtgcattggacggtgttgaacgtgcgctaaac
ggggacatcgaggaaggcagtgaagatgaagatgatgatgaggaggagcacgaggaggag
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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