KEGG   Salpingoeca rosetta: PTSG_07055
Entry
PTSG_07055        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
sre  Salpingoeca rosetta
Pathway
sre03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PTSG_07055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sre03021]
    PTSG_07055
   03036 Chromosome and associated proteins [BR:sre03036]
    PTSG_07055
Transcription machinery [BR:sre03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     PTSG_07055
   Coactivators
    SAGA/TFTC/STAGA complex
     PTSG_07055
Chromosome and associated proteins [BR:sre03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     PTSG_07055
    STAGA complex
     PTSG_07055
    TFTC complex
     PTSG_07055
    SAGA complex
     PTSG_07055
    SLIK complex
     PTSG_07055
SSDB
Motif
Pfam: WD40 TFIID_NTD2 NBCH_WD40 ANAPC4_WD40 Nup160 WD40_like RAB3GAP2_N Vfa1
Other DBs
NCBI-GeneID: 16073033
NCBI-ProteinID: XP_004992467
UniProt: F2UDX2
Position
Unknown
AA seq 695 aa
MTTPGGEERVSDADVERVVWQYFRQKNYKHALEGLVKDAASLPFARLDEGEEAPETFIKN
ELAAVVHLTKWIANSLDLYKNELNTVTYPVFVHCYLDLLYRGYDEAAKQFMLDYHHHHRD
LHDLELQQIMAVTSLEHMKTNDTVRMFRANKYKVHLCNYSWELLLGFVQEHKYNFLLRII
NQHLSITFHTGKPSQRIDVGTIGHAVGSVDQLNSIKVYWGTYQVVEDPDEMEGEGMDTAD
DAGEGEGKSEAGGEQAAKKAKTGAGDKGKDKEGDRGKSKAAEDEDEDAEGEEGAKRRRQR
KKQQDHPDAPPEEMRLKHPPIRGRMLQMRLEAMRDARRRAALSAKNLPSCCAYTFFNALK
SVAITCISFSVDSKLIATGCADSSVRVWTLTKDKLMKLLPGTKLAGFDVTATSKLEDYLD
PSTASAAKVMRGHSGPVTCVNFSPDNLFLISSSTDHTIRLWSLLTYTNVVCYRGHSYPVW
HVEFSPLNLYFATASFDHTARLWSTDQVYTKRVFAGHLSDVNCVKFHPNCNYLATASTDK
SCRLWDIQSGSCVRVFQGHRDTVHVLEFTHDGRFLASGGDDWDIMIWDLASGCRVKVLHG
HSDVVYSLAFSQEDGVLASGGADNTVRVWDCEFLQSAAQATTTLHDAPDTLQPGDASPEL
AATYYTKATPVYAVHFGSTNYLLAAGVFVPNPDKH
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgacgacgccaggaggggaagagcgggtgtccgacgccgacgtggaacgcgttgtgtgg
caatacttcagacaaaagaactacaaacatgcgctggaagggctggtcaaggatgcagcg
tctttgccatttgccaggctcgatgaaggagaagaggcaccggaaacctttatcaagaac
gaattggcggccgttgtccacctgacaaagtggattgccaattcattggacttgtacaag
aacgagctgaacaccgtgacctaccccgtattcgtgcactgctacctggacctgctgtat
cgtggctacgacgaagccgccaagcagtttatgctggactaccaccaccaccaccgggac
ttgcacgatcttgaactgcaacagatcatggccgtcacctctctcgaacacatgaagaca
aacgacaccgtccgcatgttcagggcaaataaatacaaggtgcacctctgcaactactcc
tgggagctgctgctggggtttgtgcaggagcacaagtacaacttcctcctgcgcatcatc
aaccaacatctgtccatcaccttccacacgggaaaaccgtcacagcgcattgacgtcggc
actattgggcacgccgtcggctcagtggaccagctcaacagcatcaaagtgtactgggga
acataccaagtcgtcgaggatcctgatgagatggagggagaggggatggacacagcggac
gacgcgggggagggcgaagggaagagcgaagcaggtggtgaacaggcagcaaagaaggca
aaaacaggcgcaggggacaaagggaaggataaggagggggacagggggaagtcgaaagcc
gcggaggatgaagacgaagacgcagaaggagaagaaggcgcaaagcggcggcgacagcgc
aagaagcagcaggaccacccggacgccccacccgaggaaatgcgactcaagcatccacca
atccgtggccggatgctgcagatgcgactggaagcgatgcgtgacgcccgccgtcgcgcc
gccctctctgcaaagaaccttccatcctgctgtgcttacactttcttcaacgctctcaag
tcggtcgcgatcacgtgcatttcattctctgttgacagcaagctgattgccacgggctgc
gctgacagctctgtgcgcgtgtggaccctcaccaaggacaagctcatgaagctgctcccc
ggcacaaaactcgccggctttgacgttacagcgacaagcaagctcgaggactatctggac
ccgtcgacggcgtcggcagcgaaggtgatgcgtgggcactcggggccggtcacgtgcgtc
aacttcagcccagacaacctcttcctcatctcatcctccacagaccacacgatccgcctg
tggagtttgctgacatacacgaacgtggtgtgctaccgcggccacagctatcccgtgtgg
cacgtcgagttcagcccgctcaacctgtactttgcgacggcgagctttgaccacacggca
cggctctggtccaccgaccaggtctacaccaaacgggtcttcgcaggccacctctcagat
gtgaactgtgtcaagttccaccccaactgcaactacctcgcaacggcgtccacagacaag
tcgtgccgcctctgggacattcagtccgggtcgtgtgtccgcgtcttccagggccaccgc
gataccgttcacgtgctcgagtttacacacgatggccgcttcctcgcatcgggaggcgac
gattgggacattatgatttgggatcttgcgagcggctgtcgcgtcaaagtcttgcacggc
cacagcgacgtcgtgtactcgctcgcattcagtcaggaagatggcgtgcttgcgagcggg
ggcgcagacaataccgtgcgcgtgtgggactgtgagttcttgcagtccgcggcccaggct
acgaccacgctccacgatgcacctgacacgctgcagccaggggatgcgtcgcctgagctt
gcagcgacgtactacaccaaggcgacgcccgtgtacgcggtgcactttggatcaaccaac
tacctccttgctgctggcgtgttcgttccaaacccagacaagcactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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