KEGG   Salpingoeca rosetta: PTSG_07630
Entry
PTSG_07630        CDS       T04136                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
sre  Salpingoeca rosetta
Pathway
sre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PTSG_07630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sre03041]
    PTSG_07630
   03032 DNA replication proteins [BR:sre03032]
    PTSG_07630
Spliceosome [BR:sre03041]
 Complex A
  U1 snRNP components
   Sm proteins
    PTSG_07630
  U2 snRNP components
    PTSG_07630
 Complex B
  U1 snRNP components
    PTSG_07630
  U4/U6.U5 tri-snRNP components
    PTSG_07630
 Complex C
  U2 snRNP components
    PTSG_07630
DNA replication proteins [BR:sre03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     PTSG_07630
SSDB
Motif
Pfam: LSM Tail_tube
Other DBs
NCBI-GeneID: 16071987
NCBI-ProteinID: XP_004991427
UniProt: F2UHB4
Position
Unknown
AA seq 161 aa
MPRERATSDFLKSYAHTHTHAHTHTHTHTHENSNASRLTQHTYTMKLVRFLMKLSNETVT
VELKNGTVVHGTVAGVDVAMNMHMKTVKMSIKGREATALDTLTVRGNTIRHVILPDSLPL
DTLLIDDTPKIKAKKKEVALGRGRGRGRGRGRGRGRGRGRR
NT seq 486 nt   +upstreamnt  +downstreamnt
atgccacgagagcgggcaaccagtgacttcttgaagagctacgcgcacacacacacacac
gcacacacacacacacacacacacacacacgagaacagcaacgcatcaaggcttacacaa
cacacatacaccatgaagctggttcgctttctcatgaagctgtcaaacgagacagtgaca
gtggagctgaagaacggcactgtcgttcacggcactgttgcaggcgtggatgtggccatg
aacatgcacatgaagacggtgaagatgtcgatcaagggccgtgaggcaacggcactcgac
acactcacggtcagaggaaacacaattcgtcacgtcatcctgccagacagcctacctttg
gacaccctcctcatcgacgacaccccaaagatcaaggcgaaaaagaaagaagttgctctt
ggccgtggccgtggacgtgggcggggccgtggtcgcggccgcggtcgtggtcgtggccgc
agataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (68)   
   KEGG ORTHOLOGY (1)   
   RefGene (64)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (78)   

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