KEGG   Salpingoeca rosetta: PTSG_12033
Entry
PTSG_12033        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
sre  Salpingoeca rosetta
Pathway
sre03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PTSG_12033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sre03021]
    PTSG_12033
Enzymes [BR:sre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PTSG_12033
Transcription machinery [BR:sre03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     PTSG_12033
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1
Other DBs
NCBI-GeneID: 16075817
NCBI-ProteinID: XP_004995236
UniProt: F2U5T1
Position
Unknown
AA seq 1034 aa
MTDDLLFTYTDRLLAPHLESNQRQAIIKEAGDLCKKTLRCPHCGAQNATVKKVPPMKIVH
ELYVKKHEAERDRPTHVESAGVAACSYFLHELPTRLHDELAAAAEEVDGLRSLLRQDRAQ
DVLNPLRVLELFRNIPDSDCLILDLGARPESLLLTSIICPPGCIRPSVMRDASATSSSED
PISLARNLSIGDKVLRHLLEGDYVLFNRQPSLHRMSIMCHKAKPRPWRTFRFNECVCKPY
NADFDGDEMNLHVPQTEEARAEAAELMLTTNNLCTPCNGKPLIAATQDFITGAHTSMHID
ATTHARAHMCTCMRWSGFFLPPPLGLDCSHHQPRICKQVISLLLKPNKFDPTEIYLQANN
RSYDKDYAKQEVGCFGGKPTLGEKTLCPEDGFVLIRKSQLLSGFLDKGIIGESKSSIFYA
LLCHYGAPKAAEVRMRRACLCVCACACACACVCARVFCVYVRAHACGCIVRPWCAVPCGG
VSRLHPPLSSFISRVGILRCCVGGLQCMKRLSKLTTRFLMNRGFSIGIGESTHMHASRDQ
CTKAHAHTHRRTHTSIHTHMTHACPHSLAPSCISLQRFCLIAHVTLSLSTRAHVCHFFLK
TLRAFLHKKADNIAAVRQRLDLEPCTDGPETMKDPNAQRLCDSIDGLTATQLEAFVDAAL
HKFLGCVMEPGTAVGAIAAQSIGEPGTQMTLRTFHFAGVAAMNVTLGVPRIKEIINAAKK
ISTPVIEAPLEEADNAAYARRVKGRIETITLEEVAEYVRIFCSDNESYVAVKLDLQRIAN
LFLEIDVQGVVFRIVSDRKLKVKPNDVDIKSASLFHVYPRPDTRKPSNPVHLLQALQQKL
GTVVVQGLENVNRAIVNDEGGVHKLFIDGTNMRGVMSTLGVLGEKVKCNHVMEVEKTLGI
EAARQVIMDQVQYVMSNYGISIDPRHTMLMGDLMTFKGEVLGITRFGIAKMKDSVFMLAS
FEKTIDHLFDAAMRGTTDPIEGVSECIIVGKPMKVGTGAFSLLQSPPPNQQPPKRRKLLF
DVDEYHPHVRSPLL
NT seq 3105 nt   +upstreamnt  +downstreamnt
atgacggatgacctgctcttcacctacacggaccgcttgcttgcccctcacctcgagtca
aaccagcgccaggccatcatcaaagaggcgggcgacctgtgcaagaagacgctgcgctgc
ccccactgcggcgcacaaaacgcgactgtcaagaaggtcccgcccatgaagattgtacac
gagctctatgtcaagaagcacgaggcagaacgcgatcgtcccacccatgttgaatctgcc
ggtgttgctgcctgtagctattttttgcatgagctccctacacggctgcacgatgagctg
gccgccgcggctgaggaggtggacggtctgcgttcgctgctgcgccaggatcgcgcacag
gatgtcctcaaccccctccgcgtgctcgagctctttcgcaacatccccgacagcgactgc
ctcatattggaccttggcgcgcggccggagtcgctgctgctgacgagcatcatctgcccg
cccggatgcattcgcccgtcggttatgcgcgatgcatcggccacgtcctccagcgaagac
ccaatctcccttgcgcgcaatctgagcatcggcgataaagtcctgcgccatcttcttgag
ggggattacgtcctcttcaaccgccagccatctctccatcgcatgagcatcatgtgccac
aaggcaaagccgcgaccgtggcgcacgttccgcttcaacgagtgcgtgtgcaagccgtac
aacgccgatttcgacggcgatgagatgaatcttcacgtcccgcagacggaggaggcgcgc
gccgaggccgcagagctcatgctcaccacgaacaacctgtgcacgccgtgcaatggcaag
ccgctgattgctgcgacgcaggatttcatcacgggcgcacacacgagtatgcatattgat
gcaaccacacacgcgcgcgcgcacatgtgtacgtgcatgcgttggtcgggcttcttcctc
cctcccccactcggcctggattgctcacaccaccaaccacgcatctgcaagcaggtgatt
tcgctgcttctgaagccgaacaagttcgatcccactgagatttatctccaggccaacaac
cgctcctacgacaaggactacgcgaaacaggaggtgggatgttttggtggaaagccgacg
cttggggagaagacgctgtgccccgaggatggctttgttctcatccgcaaatcgcagctg
ctgtccggcttcctcgacaagggcatcattggggagagcaagtccagcatcttctacgcg
ctcctctgtcactacggcgcaccaaaggctgcagaggtccgcatgcggcgtgcgtgcttg
tgtgtgtgtgcgtgtgcgtgtgcgtgtgcgtgtgtgtgcgcgcgtgtattttgtgtgtat
gtgcgtgcacatgcgtgtggatgcattgtgcgtccatggtgcgccgttccctgtggtgga
gtttcgcgcctgcatccaccgctttcttcgttcatctcacgtgtcggtattctgcgttgt
tgcgtgggcggcctgcagtgtatgaagcgactgagcaaactcaccacgcgcttcctcatg
aaccgcggcttctccatcggcataggtgagagcacacacatgcatgcaagcagggatcag
tgcacaaaggcacatgcacacacgcacagacgcacgcatacatccatacacacccacatg
acacatgcatgcccgcactcgctcgcacccagttgcatctccttgcaacgcttttgtttg
attgctcatgtcactctgtccctctccactcgtgcacatgtgtgtcacttcttcctgaag
acgctacgcgcgtttctgcacaagaaagcggacaacatcgccgctgttcggcagcgactg
gatctggagccctgcacagacggacccgagacaatgaaggaccccaatgcacagcggctg
tgtgacagcattgacggactgacggcgacgcagcttgaggcgtttgttgacgcggcgctg
cacaagttcctcggatgtgtgatggaacctggcaccgctgttggcgccattgctgcgcag
agtattggcgagccgggaacacagatgacactgcggacgttccatttcgctggtgtcgct
gccatgaacgtgacgctcggtgttccgcgcatcaaggagattatcaacgcggcgaagaag
atcagcacgcccgtgattgaggcgccgctggaggaggccgacaacgccgcatatgcgcga
cgcgtcaagggcaggatcgagacaatcaccctcgaggaggttgcggagtatgtgcgcata
ttctgcagcgacaacgagtcgtacgttgcggtgaagcttgatcttcagcgcatcgccaac
ctgttcctggagattgacgtgcagggcgttgtgttccgcatcgtgtctgaccgcaagctc
aaggtcaagccaaacgacgtcgatatcaagagtgccagcctcttccacgtgtacccgcgc
ccagacacgcgcaaaccgtccaaccccgtgcatctgttgcaagcgctgcagcagaagctc
ggtaccgtcgtcgtgcaggggcttgaaaacgtcaaccgcgcgattgtgaacgacgagggc
ggtgtgcacaaactatttatcgacggaaccaacatgcgcggcgtcatgtcaacgctgggt
gtgcttggggagaaggtcaagtgcaaccacgtgatggaggtggagaagacgcttggtatt
gaggcggcacgacaggtgatcatggaccaggtgcagtatgtcatgtcaaactacggcatc
agcatcgatccacgccacaccatgctcatgggcgacctcatgaccttcaagggtgaagtg
cttggcatcacacgatttgggattgcaaagatgaaggacagcgtgtttatgctcgcgtcc
tttgagaagaccatcgaccacttgttcgacgctgccatgcgtggcacaacggacccgatt
gagggtgtgagtgaatgtatcattgttggaaagccgatgaaggttggaacaggcgccttc
tcccttctgcagagcccgccaccaaaccagcagccgccaaaacgccgcaagctgctgttt
gacgtggacgaataccatccccacgttaggtcgcccttgttgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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