KEGG   Streptomyces rochei: SRO_1721
Entry
SRO_1721          CDS       T06265                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
srj  Streptomyces rochei
Pathway
srj03030  DNA replication
srj03430  Mismatch repair
srj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:srj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SRO_1721
   03430 Mismatch repair
    SRO_1721
   03440 Homologous recombination
    SRO_1721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:srj03032]
    SRO_1721
   03400 DNA repair and recombination proteins [BR:srj03400]
    SRO_1721
Enzymes [BR:srj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SRO_1721
DNA replication proteins [BR:srj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SRO_1721
DNA repair and recombination proteins [BR:srj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SRO_1721
SSDB
Motif
Pfam: RNase_T Rv2179c-like MtrC DEDDh_C
Other DBs
NCBI-ProteinID: BBC92897
Position
complement(1949251..1949973)
AA seq 240 aa
MGWHQELLVGFDLETTGTDPREARIVTGAVIEVRAGEPLGHREWLADPGVKIPADAVAVH
GISNERAAAEGEPADRVADALAEALVSYWRTGVPVVAYNAAFDLTLLSAELRRHRLPSLA
DRLGGTAPAPVIDPYTIDRRADRYRRGKRNLEAVCAEYGIVLEAAHNASADALAAARLAA
AIAVRHPKIAALGPAELHRRQIEWYAEWAADFQAFLRRKGDATAVVDGLWPLRELTPETV
NT seq 723 nt   +upstreamnt  +downstreamnt
atgggctggcaccaggagctgctggtcggcttcgacctggagacgaccggcacggatccg
cgcgaggcacgcatcgtcaccggcgcggtgatcgaggtcagggccggtgagccgctgggc
caccgggagtggctggccgatccgggcgtcaagatcccggcggacgcggtcgccgtgcac
gggatcagcaatgaacgggcggcggccgagggcgagcccgccgaccgggtcgccgacgcc
ctcgccgaggcactggtgtcgtactggaggacgggcgtcccggtcgtcgcctacaacgcg
gcgttcgacctcaccctgctctccgccgaactgcgccgccaccggctgccgtccctcgcc
gaccgcctcggcggaaccgcgcccgcgccggtgatcgacccgtacaccatcgaccgccgg
gcggaccgctaccgccgcggaaagcggaacctggaagcggtctgcgccgagtacggcatc
gtcctggaggcggcgcacaacgcgtccgccgacgccctcgccgcggcccgcctcgccgcc
gcgatagccgtccgccaccccaagatcgccgccctcggcccggccgaactgcaccgcagg
cagatcgagtggtacgccgaatgggccgccgacttccaggccttcctgcgccgcaagggg
gacgcgacggcggtcgtggacggactgtggccgctgcgcgagctgacgcccgagacggtg
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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