KEGG   Streptomyces rochei: SRO_3020
Entry
SRO_3020          CDS       T06265                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
srj  Streptomyces rochei
Pathway
srj03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:srj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SRO_3020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:srj03021]
    SRO_3020
   03400 DNA repair and recombination proteins [BR:srj03400]
    SRO_3020
Enzymes [BR:srj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SRO_3020
Transcription machinery [BR:srj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SRO_3020
DNA repair and recombination proteins [BR:srj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SRO_3020
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5
Other DBs
NCBI-ProteinID: BBC94196
Position
complement(3400734..3401756)
AA seq 340 aa
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgctgatcgctcagcgtccttcgttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctccgccgt
accctcctgtcctcgatccccggtgccgctgtcaccagcatccggatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtgaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgcggtgcagaacaagcaggtgggccaggagatcggc
cgtatcccggtcgactccatctactcgccggttctcaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtggatgtcgagaccaagcag
gcgatgcgtccgcgtgacgccatggcctccgccggcaagaccctggtcgagctgttcggt
ctcgcgcgcgagctgaacatcgacgccgagggcatcgacatgggtccgtccccgacggac
gccgcgctcgccgcggatctggcgctgccgatcgaggagcttgagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggcgcgttccgag
gcggacctgctggacatccgcaacttcggtgcgaagtccatcgacgaggtcaaggcgaag
ctggccggcatgggcctggcgctcaaggacagcccgcccggattcgacccgacggccgcc
gcggacgcctttggcgcggacgacgacgcggacgccggtttcgtcgagaccgagcagtac
tga

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