KEGG   Serratia plymuthica 4Rx13: SOD_c02800
Entry
SOD_c02800        CDS       T02710                                 
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
srl  Serratia plymuthica 4Rx13
Pathway
srl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:srl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SOD_c02800 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srl03019]
    SOD_c02800 (groL)
   03110 Chaperones and folding catalysts [BR:srl03110]
    SOD_c02800 (groL)
   03029 Mitochondrial biogenesis [BR:srl03029]
    SOD_c02800 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:srl04147]
    SOD_c02800 (groL)
Enzymes [BR:srl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SOD_c02800 (groL)
Messenger RNA biogenesis [BR:srl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SOD_c02800 (groL)
Chaperones and folding catalysts [BR:srl03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SOD_c02800 (groL)
Mitochondrial biogenesis [BR:srl03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SOD_c02800 (groL)
Exosome [BR:srl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SOD_c02800 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   SOD_c02800 (groL)
  Exosomal proteins of breast cancer cells
   SOD_c02800 (groL)
  Exosomal proteins of colorectal cancer cells
   SOD_c02800 (groL)
  Exosomal proteins of bladder cancer cells
   SOD_c02800 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1 V18-19
Other DBs
NCBI-ProteinID: AGO53296
Position
314598..316244
AA seq 548 aa
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKATLEDLGTAKRIVINKDTTIIIDGNGEEPAIQGRVSQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAASKLSDLRGVNEDQNVGIKVALRAMESPLRQIVLNCGEEPSVVANTVKAGEGNYGYNA
ATEEYGDMIAMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKSDAPDLGGAGGMGG
MGGMGGMM
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcagctaaagacgtaaaattcggcaacgacgctcgcgtgaaaatgctccgcggcgtg
aatgttctcgctgatgcagtaaaagtgaccctgggcccgaaaggccgtaacgtagtgctg
gataaatccttcggcgctcctaccatcactaaagatggcgtatccgttgcccgtgaaatc
gaactggaagacaagtttgaaaacatgggtgcgcagatggtgaaagaagtggcctccaaa
gcgaacgacgctgcgggcgacggcaccaccactgcaaccgtactggctcaatccatcatc
accgaaggcctgaaagcagtagctgccggcatgaacccgatggatctgaagcgcggtatc
gacaaagcggttatcgccgctgttgaagagctgaaaaaactgtccgtaccttgctctgac
tccaaagctatcgctcaggtaggcaccatctctgcaaactccgacgaaaccgtgggtaaa
ctgattgcagaagccatggagaaagtgggcaaagaaggcgttatcaccgttgaagaaggc
actggcctgcaagacgagctggacgtcgttgaaggtatgcagttcgaccgcggctacctg
tctccttacttcatcaacaagccggaaaccggttctatcgagctggaaagcccgttcatc
ctgctggctgacaagaaaatctccaacatccgtgaaatgctgccagtactggaagccgtg
gcgaaagccggcaagccattgctgatcatcgctgaagatgttgaaggcgaagcactggct
accctggtggtcaacaccatgcgcggcatcgtgaaagtggctgcggttaaagcacctggt
ttcggcgaccgtcgtaaagccatgctgcaggatatcgctaccctgactggcggtaccgtt
atctctgaagagattggtctggagctggaaaaagcgactctggaagacctgggtacggct
aaacgcatcgttatcaacaaagacaccactatcatcatcgatggcaatggtgaagaacct
gcgatccagggccgcgtgtcccagattcgtcagcagatcgaagaagcaacttctgattac
gaccgtgaaaaactgcaagagcgcgtagctaaactggctggcggcgttgcggtaatcaaa
gtcggcgctgctaccgaagttgaaatgaaagagaagaaagctcgcgttgaagatgctctg
cacgcaacccgtgcagcggtagaagaaggcgtagttgctggtggtggtgttgcgctgatt
cgcgctgcgtccaaactgagcgatctgcgtggcgtgaacgaagatcagaacgtgggtatc
aaagttgcgctgcgcgcaatggaatcaccactgcgtcagatcgttctgaactgcggcgaa
gagccttctgttgttgccaacaccgtgaaagcgggcgaaggtaactacggttacaacgca
gcaactgaagaatacggcgacatgatcgcgatgggtatcctggatccaaccaaagtaacc
cgttctgctctgcagtacgcggcttctgtggctggcctgatgatcaccaccgagtgcatg
gtgaccgacctgccgaaaagcgatgcgcctgatttaggcggcgctggcggtatgggcggc
atgggtggcatgggcggcatgatgtaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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