KEGG   Serratia plymuthica 4Rx13: SOD_c06910
Entry
SOD_c06910        CDS       T02710                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
srl  Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:srl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:srl03016]
    SOD_c06910 (truD)
Enzymes [BR:srl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     SOD_c06910 (truD)
Transfer RNA biogenesis [BR:srl03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SOD_c06910 (truD)
 Prokaryotic type
    SOD_c06910 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AGO53698
Position
769851..770897
AA seq 348 aa
MDMANLTWLHGQPQSTGVLKASPEDFVVVEDLGFEPDGEGEHVLVNIRKNGCNTQFVADY
LARFAGIHARSVSYAGLKDRHAVTEQWFCLHLPGKETPDFSQFSLEGCEVLASARHLRKM
RIGTLKGNAFTLVLRQISDRQDVEQRLQVIAAGGVPNYFGSQRFGRGGNNLVMARRWAND
EIRVKERSKRSFYLSASRSALFNLIASRRLANQQHRTVLEGDALQLTGRGSWFVAKPDEL
AELQQRLDAGELLITAPLPGDGEPGTAGEALNVEQQCLAEQPELMALLKRERVDPARRAL
LLQPQKMQWNWWDDATVELRFWLPAGSFATSVVREIMRQESNDADISE
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggatatggctaatttgacctggctgcacggccagccgcaaagcacaggcgtgctgaaa
gccagcccggaagatttcgtggtggtggaggatctgggctttgagccggacggagaaggc
gaacatgtactggtgaacatccgcaagaacggatgtaacacccagtttgtcgccgattat
ctggcgcgtttcgccggcattcacgcccgttcggtcagctacgccggcctgaaagatcgc
catgcggtgaccgaacaatggttctgcctgcatctgccgggcaaagaaacgcctgatttc
agccaattctcgctggagggctgcgaagtgctggccagtgcccgccatctgcgaaaaatg
cgcatcggtacgctgaaaggcaatgcttttactctggtgctgcgtcagatctccgatcga
caggatgtggaacagcgcctgcaggtcattgcggcgggtggcgtgccgaactatttcggc
agccagcgttttggtcgcggtggcaataacctggtcatggcgcgtcgctgggcgaatgat
gagatccgggttaaagaacgcagcaagcgcagtttttatctttccgccagccgcagcgcg
ctgtttaacctgatcgccagccgacgcttggccaatcaacagcaccgcacggtgctggaa
ggggatgcgctgcaacttaccggccgcggcagttggtttgtcgccaaaccggacgaactg
gctgagttgcagcagcggctggatgccggtgagctgttgattaccgcaccgttgccgggc
gacggcgaaccgggcaccgccggggaagcgctgaacgttgaacaacaatgtttggcggaa
cagccggagctgatggcgttgttaaagcgggaacgcgttgatccggctcgtcgcgcattg
ttgctgcagccgcaaaagatgcagtggaattggtgggacgatgccaccgttgaattgcgt
ttttggctgccggccggcagttttgccaccagcgtggtgcgcgaaatcatgcggcaagag
agcaatgacgcggacattagcgagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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