KEGG   Serratia plymuthica 4Rx13: SOD_c11970
Entry
SOD_c11970        CDS       T02710                                 
Symbol
ybhF
Name
(GenBank) putative ABC transporter ATP-binding protein YbhF
  KO
K25182  drug efflux transport system ATP-binding protein
Organism
srl  Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:srl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:srl02000]
    SOD_c11970 (ybhF)
Transporters [BR:srl02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Drug efflux transporter
    SOD_c11970 (ybhF)
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 AAA_23 AAA_22 AAA_30 AAA AAA_27 RsgA_GTPase CLP1_P SRP54 AAA_24 AAA_16 nSTAND3 TsaE ATP_bind_1 cobW nSTAND1 DO-GTPase2 DUF87
Other DBs
NCBI-ProteinID: AGO54182
Position
complement(1317022..1318752)
AA seq 576 aa
MEQVIELEALEKRFPSLAKPAVASLTTRLTSGAVTGLVGPDGAGKTTLLRMLAGLLKPSS
GTLRVAGLDPIAQDRQLHAILGYMPQKFGLYEDLTVMENLTLYADLRGVTGDLRKQTFER
LLTFTDLTRFTTRLAGKLSGGMKQKLGLACTLVGQPQVLLLDEPGVGVDPISRRELWRMV
HELANDGMLILWSTSYLDEAEQCREVLLLNEGELLFSGAPKDLTQRMAGRTVLIAPPAGS
HRALLQRAICLPSVTDGVIQGKYLRLILKQGEDHRQILQALDLPDAEMTEADPRFEDAFI
DLLGGGPNSKSALAEIMPTVEGESTQTVIEAQGLTKKFGDFAATDHVDFKVQRGEIFGLL
GPNGAGKSTTFKMMCGLLVPTEGKALVLDMDLKTSSGKARQRLGYMAQKFSLYGNLTVAQ
NLKFFSGVYGLSGKAQRDKINEMSTAFNFGPILGQTPDSLPLGFKQRLALACALMHEPDI
LFLDEPTSGVDPLTRREFWLHINGMVDKGVTVMVTTHFMDEAEYCDRIGLVYRGKIIAAG
TPDDLKQQVACDDNPNPSMEQAFIDLVQGYDREEQP
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggaacaggtcattgaactggaggcgttggaaaaacgtttcccgtcgttggcaaaaccc
gcggtcgccagcctgaccacccgcctgaccagtggcgcggtcacagggctggttggcccg
gacggcgccggcaaaaccacgctgctgcgcatgctggccgggttgctgaaacccagcagc
ggtacgctgcgcgtcgccgggttggatccgatcgcgcaagatcgtcaactgcacgccatc
ctcggctacatgccgcagaagttcggcctgtatgaagatctgacggtcatggaaaacctg
acgctgtacgccgatctgcgcggcgtcaccggcgatctgcgtaaacaaaccttcgagcgg
ttgctgaccttcaccgatctcactcgctttaccacccgccttgcgggcaagctttccggc
ggcatgaaacaaaaactcgggctggcctgcacgctggtgggccaaccgcaggtgctgctg
ctggatgagcctggggtcggggtcgatccgatctcgcgccgcgagctgtggcgcatggtg
catgagctggccaacgacggcatgctgatcctgtggagcacctcctatcttgacgaggcc
gagcagtgccgcgaagtgctgctgctcaatgaaggtgaattgctgttcagcggcgcgcct
aaagatctgactcagcgcatggccgggcgcacggtattgatcgctccccccgccggcagc
caccgcgccctgctgcaacgggctatctgcctgccttcggtcaccgacggggtgatccag
ggcaaatacctgcggctgatcctcaagcagggcgaagatcaccgccagatactgcaagcg
ctggatctgccggatgcggaaatgacggaagcggatccgcgcttcgaggatgcgtttatc
gatctgctcggcggcgggccaaacagtaaatcggcgctggcggagatcatgcccaccgtc
gagggcgaaagcacgcaaacggtgattgaagctcaggggctgaccaagaaattcggcgat
ttcgccgccaccgaccatgtggacttcaaggtgcaacgcggcgagattttcggcctgctc
ggcccgaacggcgccggcaaatccaccaccttcaaaatgatgtgcgggctgctggtgccg
actgaaggcaaggcgctggtgctggatatggatctgaaaaccagctccggcaaggcgcgt
cagcgtctgggctatatggcgcagaaattctcgctgtacggcaacctgacggtggcgcag
aacctgaaatttttctccggtgtttacggcctgagcggcaaagcgcagcgcgacaaaatc
aacgagatgtcgaccgccttcaactttgggccgatcctcggccaaacgccggattcgctg
ccgctcggcttcaagcaacggctggccttggcctgcgcgctgatgcacgaaccggacatt
ctgtttctcgacgaaccgacctcgggcgtagaccccctgacccgccgcgagttctggttg
cacatcaacggcatggtggataaaggcgtgacggtgatggtcacgacccactttatggac
gaggcggaatactgcgatcgcatcgggctggtgtatcgcggcaagatcatcgccgccggc
acgccggacgatctcaaacagcaggtagcctgcgacgacaaccccaacccttcaatggag
caggcgtttatcgatctggtgcagggttacgatcgggaggagcagccgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (26)   

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