KEGG   Salinibacter ruber M8: SRM_02710
Entry
SRM_02710         CDS       T01209                                 
Symbol
trmU
Name
(GenBank) Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
srm  Salinibacter ruber M8
Pathway
srm04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:srm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    SRM_02710 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:srm03016]
    SRM_02710 (trmU)
Enzymes [BR:srm01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     SRM_02710 (trmU)
Transfer RNA biogenesis [BR:srm03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    SRM_02710 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_M tRNA_Me_trans_C ThiI Arginosuc_synth QueC ATP_bind_3 NAD_synthase GLOD4_C Asn_synthase SspH
Other DBs
NCBI-ProteinID: CBH25631
UniProt: D5HC76
Position
complement(3180396..3181547)
AA seq 383 aa
MSKKGRVLVAMSGGVDSSVTAVLLKERGYDVVGLTMKTWDYSTSGGRDGKEVGCCSIESM
NDARVVATEHGFPHFVVDLREEFGDWVIERFTDEYLSGRTPNPCVLCNTHIKWDALLQRA
DDLDCEYIATGHYANVRYDDERDRYLLSRGLDRNKDQSYALWGLPQEHLARSIFPLGAYE
KPEIREMAAEFGLDNVADKPDSYEICFIPDNDYPRFLKDRVDGLEEEVSGGTFVLSDGTV
VGEHDGYPFYTIGQRRGLDLALGERVYVTDIDPETNTITVGPREELMEQTLTAHEINLVK
YPELDGERPAWGTIRYNDDGAGCLAWQPDEDTLKVAFAEPKRAITPGQSLVLYEDDDVLG
GGWIHEVGGAENEAAERAAEAPA
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgagcaagaagggacgcgtgctcgtcgccatgagtggcggcgtcgactcctcggtgacg
gccgtgctgctcaaagagcgcggctacgatgtggtgggcctcaccatgaaaacctgggac
tattccaccagcggggggcgcgacggaaaagaagtgggctgctgctccatcgagtcgatg
aacgacgcccgtgtggtggcgactgagcacggctttccgcacttcgtcgtggacctgcgg
gaggagtttggggactgggtgatcgagcgcttcaccgacgagtacctctcgggccgcacg
cccaacccctgcgtgctctgtaacacccacatcaagtgggacgccctgttgcagcgggcc
gacgacctggactgcgagtacatcgccacgggccactacgccaacgtccgttacgacgac
gaacgggaccgctacctcctgagccgcgggctcgaccgcaacaaggaccagagctacgcg
ctctggggcctgccacaggagcacctcgcccgctcgatcttcccccttggcgcgtacgag
aagccggagatccgcgagatggcggcggagttcggcctcgacaacgtagccgacaagccg
gactcctacgagatctgcttcatcccggacaacgactaccctcggttcctgaaggaccgc
gtcgacgggctcgaggaggaggtaagcggcggcacgttcgtgctcagcgacggcaccgtg
gtgggggagcacgacggctaccccttctacaccatcggccagcgccgggggctggacctc
gcgctcggcgagcgggtctacgtgaccgacattgaccccgagacaaacacgatcacggtg
gggccgagggaggagctcatggaacagaccctgacggcccacgagattaacctcgtgaag
taccccgagctcgacggggagcgcccggcctgggggaccatccgctacaacgacgatggg
gcggggtgcctggcctggcagccggacgaggacaccctgaaggtggcctttgccgagccg
aagcgcgccatcacgccggggcaaagcctcgtgctatacgaggacgacgacgtgctcggc
ggggggtggattcacgaggtgggcggggccgagaacgaggcggcggagcgggcggccgaa
gccccagcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (29)   

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