KEGG   Streptosporangium roseum: Sros_1080
Entry
Sros_1080         CDS       T01137                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
sro  Streptosporangium roseum
Pathway
sro03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Sros_1080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sro03021]
    Sros_1080
   03400 DNA repair and recombination proteins [BR:sro03400]
    Sros_1080
Enzymes [BR:sro01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Sros_1080
Transcription machinery [BR:sro03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Sros_1080
DNA repair and recombination proteins [BR:sro03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Sros_1080
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 TarH
Other DBs
NCBI-ProteinID: ACZ84079
UniProt: D2B9S3
Position
1103724..1107611
AA seq 1295 aa
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITHVDKEMRERDLPSLEAKISVERQHVEQRRDADIEARQKKLEND
LAELEAAGAKGDQRRKVREGAEREMRQLRDRAQRELDRLDEVWSRFKNLKVQDLEGDELL
YREMRDRFGRYFRGGMGAQAIQERLTNFDLDLEAENLRETIRSGKGQKKARALKRLKVVS
AFLNTRNSPNGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPADGKPVTMPTQDMIIGLYSLTTLKDDDEDAPG
QGRVFGSVSEALMAYDRRELDIQAKIQIRLKGEVPPPRGWTAPEGWEPGDSYRLETTLGR
CLFNQTLPANYPYVNSQVGKKQLSAIVNELAEKYPKVEVAAALDALKDAGFYWATRAGVT
ISIEDVISPPNKAAIMETYERRADKVQREYERGLITDEERRQELIEIWTHATSDVTDDMQ
KAFPKTNPVWMMVQSGARGNLMQVRQISGIRGLVSNTKGETIPRPIKASFREGLSVLEYF
ISTHGQRKGLADTALRTADSGYLTRRLVDVAQDVIVREIDCGTDRGVPLHVGERDSQGNL
VKAENAESNVHGRIMAEDVEVDGKVIASAGVDINDTHVTALVEAGVETVRTRSALVCEAK
IGVCATCYGRSLATGKLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGADITHGLPR
VQELFEARVPKGVAPISEAEGRVRIDETDKSRKIVIVPDDGSEEVAYPVSMRSRMLVSDG
QRVTVGQQLIAGAVNPNEVLRILGPRAVQLHLVAEVQQVYRSQGVSIHDKHIEIIVRQML
KRVNVLESGDADMLPGELVERPRFERINRECVAEGGTPASGRPVLMGITKASLATESWLS
AASFQETTRVLTDAAIHAKSDSLLGLKENVIIGKLIPAGTGMPQYRNIRVEPTEEAKAAM
YTVGGYDGSAADYTFGSGSGEAVPLEEYDFGQYNR
NT seq 3888 nt   +upstreamnt  +downstreamnt
gtgctggacgtcaacttcttcgacgagcttcggatcggcctcgcgacggctgacgatatc
cgccagtggtcgcacggcgaggtgaagaagcccgagaccatcaactaccggaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggcccgacccgggactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtgacccgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggtgtcccgtcccgtctgggatacctgctcgacctg
gccccgaaggaccttgagaaggtcatctacttcgcggcctacatgatcacgcatgtcgac
aaggaaatgcgtgagcgtgacctgccctcgctcgaggcgaagatctcggtcgagcggcag
cacgtcgagcagcgtcgcgacgccgacatcgaggcccggcagaagaagctcgagaacgac
ctggccgagctggaggccgccggcgccaagggcgaccagcgccgcaaggtccgtgagggc
gctgagcgcgagatgcgccagctccgcgaccgggcccagcgcgagctggaccgtctggac
gaggtctggagccgcttcaagaacctcaaggtccaggaccttgagggcgacgagctgctc
taccgcgagatgcgcgaccgcttcggccgctacttccgcggtggcatgggcgcccaggcc
atccaggagcgtctgaccaacttcgacctcgacctcgaggccgagaacctgcgcgagacg
atccgcagcggcaagggccagaagaaggcccgcgcgctcaagcgtctcaaggtcgtgtcc
gcgttcctgaacacccgcaactcgcccaacggcatggttctggactgcatcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccggttcgcgacctcggacctg
aacgacctgtaccgccgtgtgatcaaccggaacaaccgcctcaagcgtctcctcgacctc
ggcgcccccgagatcatcgtgaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccgcccggtcacgggtcccggcaaccgcccgctgaag
tccctcagcgacatgctgaagggcaagcagggccggttccgccagaacctgctgggcaag
cgagtcgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaagcagatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgatctcaaccacgcgcagaacatcaagtcggccaagcggatggtcgagcgtgcccgc
ccggtcgtctgggatgtcctcgaagaggtcatcaccgagcacccggtgctgctcaaccgt
gcgcccacgctgcaccgtctgggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtcggccgaggcgcaggccgaggcccgcatcctgatgctg
tcgaccaacaacatcctgaagccggccgacggcaagcccgtgaccatgcccacccaggac
atgatcatcggcctgtactcgctgaccaccctcaaggacgacgacgaggacgctcccggc
cagggcagggtcttcggctcggtgtccgaggcgctcatggcctatgaccggcgcgagctg
gacatccaggccaagatccagatccggttgaagggtgaggtcccgccgccccgcggctgg
actgcccccgagggctgggagccgggtgacagctaccgcctggagaccacgctcggccgc
tgcctgttcaaccagacgctgccggcgaactacccgtacgtgaactcccaggtcggcaag
aagcagctctcggcgatcgtcaacgagctggccgagaagtaccccaaggtggaggtggcg
gccgcgctcgacgcgctcaaggacgccggcttctactgggccacccgggccggtgtgacg
atctccatcgaggacgtcatctcgccgcccaacaaggcggcgatcatggagacgtacgag
cgcagggccgacaaggtccagcgcgagtacgagcgcggtctcatcacggacgaggagcgc
cgtcaggagctcatcgagatctggacgcacgcgaccagtgacgtgaccgacgacatgcag
aaggcgttcccgaagaccaacccggtctggatgatggtccagtcgggcgcccgaggaaac
ctgatgcaggtccggcagatctccggtatccgcggtctggtgtccaacaccaagggtgag
acgatcccgcgtccgatcaaggcctcgttccgcgagggcctgtcggtgctggagtacttc
atctccacccacggacagcggaagggtctggcggacaccgcgctgcggaccgccgactcg
ggttacctgacccgtcgtctggtggacgtcgcgcaggacgtcatcgtccgtgagatcgac
tgcggcaccgaccgcggggtcccgctgcacgtcggcgagcgtgactcccagggcaacctg
gtcaaggcggagaacgccgagagcaacgtgcacggccgcatcatggccgaggacgtcgag
gtggacggcaaggtcatcgcgtccgcgggggtcgacatcaacgacacccacgtcaccgcg
ctggtcgaggccggagtggagaccgtcaggacccgcagcgctctcgtctgcgaggccaag
atcggtgtctgcgccacctgctacggccgctcgctcgcgaccggcaagctcgtggacgtc
ggcgaggcggtcggcatcatcgccgcccagtcgatcggcgagccgggcacccagctgacg
atgcgtaccttccacaccggtggtgtggcgggtgcggacatcacccacggtctgccccgt
gtgcaggagctcttcgaggcgcgcgtccccaagggcgtcgccccgatcagcgaggccgag
ggccgggtccggatcgacgagacggacaagtcccgcaagatcgtgatcgtcccggacgat
ggttcggaggaggtcgcctacccggtctccatgcggtcgcgcatgctggtctccgacggg
cagcgcgtcacggtcggtcagcagctgatcgccggtgccgtcaaccccaacgaggtactg
cgcatcctcggcccccgggccgtgcagctgcacctggtggccgaggtccagcaggtctac
cgctcgcagggtgtgtcgatccacgacaagcacatcgagatcatcgtccggcagatgctc
aagcgcgtgaacgtgctggagtccggtgacgccgacatgctgcccggtgagctggtcgag
cggccgcgcttcgagcggatcaaccgcgagtgcgtggccgagggcggtacgccggcctcg
ggccgtccggtgctgatgggcatcacgaaggcctcgctcgccaccgagtcctggctgtcg
gcggcgtccttccaggagaccacccgggtgctcaccgacgcggcgatccacgccaagtcg
gactcgctgctcggtctcaaggagaacgtcatcatcggaaagctcatcccggccggtacc
ggcatgccgcagtaccgcaacatccgggtcgagcccaccgaggaggccaaggccgcgatg
tacacggtcggcggctacgacggctccgcggcggactacaccttcggttcgggctccggc
gaggccgtgccgctggaggagtacgacttcggtcagtacaaccgctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system