KEGG   Streptosporangium roseum: Sros_8886
Entry
Sros_8886         CDS       T01137                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
sro  Streptosporangium roseum
Brite
KEGG Orthology (KO) [BR:sro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sro03016]
    Sros_8886
Enzymes [BR:sro01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     Sros_8886
Transfer RNA biogenesis [BR:sro03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    Sros_8886
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: ACZ91519
UniProt: D2B7J8
Position
complement(9814979..9815551)
AA seq 190 aa
MRLFVGLPLPQRVRDELGHALEPHRAAWPGLRWPDPETWHVTLSFLGEVPETVLPELETR
LARAASRYAPMTLLLTGAGAFPSARRARVFWTDVRGCRPRLVRLADSLGAGALRAGAVHA
DRRRLRPHLTLARSRADADLQRLVEDFGSFAGTAWEAGSVHLVRSHLGAVVRYETVAEYP
LVTPAPGGRS
NT seq 573 nt   +upstreamnt  +downstreamnt
gtgcggctgttcgtggggttaccgctgccgcagcgggtgcgtgacgagctcggccacgcc
ctcgaaccccaccgcgccgcgtggcccggtctccgctggccggacccggagacctggcac
gtgacgctgtcgttcctgggagaggtgccggagacggtgctgcccgagctggagacgcgg
ctcgcccgtgccgcgtcgcgctacgcgccgatgacgctgttactcaccggcgcgggcgcc
ttcccctcggcacgccgggcccgcgtcttctggaccgacgtgcgcggctgccgcccccgg
ctcgtccggctggccgactccctgggggcgggggcgctccgtgcgggagccgtacacgcc
gaccggcggcggctccggccgcacctgaccctggccaggtcccgcgccgacgccgacctg
cagcgcctggtcgaggacttcgggtcgttcgccggaaccgcctgggaggccggctccgtc
cacctggtgagaagccatctgggagccgtggtccgctacgagacggtcgcggaatacccc
ctggtgaccccggcacccggtggacggagctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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