KEGG   Spiribacter roseus: BBH56_04955
Entry
BBH56_04955       CDS       T06143                                 
Name
(GenBank) exodeoxyribonuclease V subunit gamma
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
sros  Spiribacter roseus
Pathway
sros03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sros00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BBH56_04955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sros03400]
    BBH56_04955
Enzymes [BR:sros01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BBH56_04955
DNA repair and recombination proteins [BR:sros03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BBH56_04955
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: AUB78506
Position
998353..1001820
AA seq 1155 aa
MTETFTPGLAAIHANRLETLRDLIVSHLQAHPPAPLESETFLVQSNGMAQWLRHAFAASN
DGAGGGAGIAAAQRFVLPQSFLWQACRLVLGASRIPETSPFDKTRLQWRIYRLIPEQLEA
HPQTFAALDHYLGDDPDPRKRHQLARRLADLYDQYQVYRPDWLADWLAGDDILRDGHGQT
TPLDASLQWQAQLWRALHADIGAGAEALSRPAIQAQLIAALDAAEPGEWPALPRRLTVFG
VTSMPRPVLDALHALSRHCQILQLVQNPSGYFWADLVEDRDLLKLDQRRHQRHFGTPGQP
LLAAWGKQGRDFIALLNEIDQPERYRDWFQTIDAFEPPIPATASITDYPLLEQIQQDIFD
LTPLPSPGEERPLVRDASIRFHRAHSRQREVEVLHDRLLDAFEQAARTERPLRPRDIIVM
VPDIDTYAPAVEAVFGRLDRHDHRYIPYTIGDRRARSEAPVATAIERLTDLPNARLTLGE
VLDLLEVPAFRQRFGLGEEDLIILREWCRDAGVRWGLDAERRESLDIARGFEQNSWRFGL
RRMLLGYAVGAGDAWQDIEPYPEVGSLDAALLGPLRALLDTLEHHAAAFREPGRPRDWAD
RLSALIDDCLSLQGSEELALESRLADAMTEWLNACDEAAFNDPIPLTVARDAWLAVLEDE
GPSQRFLAGRVNICTMMPMRSIPFRLVCLLGMNDGEYPRTRPPVDFDLMAAGGQYRPGDR
SGRDDDRYLFLEALLAARDHLHVSWIGRNPRDDSELPPSVLVSQLRDHLDRGWRLDEPDT
DSTAVTPHLTVDHPLQPFSPRYDGQGEYFTYASEWRHDARPMDESPALGPPLLASPQALG
LRDLATFLSDSAGHFAGERLKLRFDETRDATPDSEPFELAGLARYSVQDALLAPLRRQDP
PDDPDPAIAAAGARLQRSGELPVAGMGRIALDQSIAQALRAARRWQVWRARGPAPEPPQE
LRLSRDVDDQPFVIEDWSADLYRLADGERLRLVLKAGDTLKAGHPHYPRLLSDWVQHLAL
NAAGFNARSVIIAHDATHSLPAMPCGSAAGPLDDILRGWRAGLERPLPLPVRTVFALLGQ
APDKPINAGTARPHYEGTTRHPGEMTFAGNGALRRCFPDADALFEPSTDASPLLVAWATR
LYQPLIDALIREDGS
NT seq 3468 nt   +upstreamnt  +downstreamnt
atgacagagacattcacgccggggttggcggccattcatgccaaccgactcgaaacgctg
cgcgacctgatcgtcagccacctgcaggcccatccgcccgcacccctcgagtcggagacc
tttctggtgcagtccaatggcatggcgcagtggctgcgtcacgccttcgcggcatccaat
gacggtgccgggggcggcgcgggcatcgccgcggcccagcggttcgtgctgccgcagtcg
ttcctctggcaggcctgccgcctggtcctcggcgccagccggatcccggagacatcgccg
tttgacaagacccgcctgcagtggcggatctatcggctcatccccgaacagctcgaggcc
cacccgcagacgttcgccgccctggatcactacctgggcgatgaccccgacccgcgcaag
cgccatcagctcgcccggcgcctcgccgatctgtacgaccagtaccaggtctatcgcccg
gactggctggccgactggctggccggcgacgacatcctgcgcgacgggcacggccagacc
acacccctggatgccagcctgcaatggcaggcgcagctctggcgggccctccatgccgat
atcggcgccggcgccgaagccctctcgcggcccgccatccaggcgcagctgatcgccgcg
ctggacgcggccgaaccgggcgaatggcccgcgctgccacggcgcctgaccgtattcggc
gtcacctcgatgccgcggccggtcctggatgccctgcatgccctgtcgcggcattgccag
atcctgcagctggtccagaacccctcgggctacttctgggccgacctggtcgaggaccgc
gacctgctcaagctggaccagcgccgccatcaacgccacttcggtacgccgggacagccg
ctgctggcggcatggggcaagcagggccgcgacttcatcgcgctgctcaatgaaatcgac
cagccggagcgataccgtgactggttccagaccattgacgcgttcgagccaccgatcccc
gcgacggcgtcgatcaccgactatccgctgctcgagcagatccagcaggatatcttcgac
ctgacgcccctgccctcacccggggaggagcgccccctcgtccgggacgcgtccatccgc
tttcatcgtgcccacagccggcagcgcgaggtggaggtcctccatgaccggctgctcgac
gccttcgagcaggccgcgcggacggaacgaccgctgcggccgcgggacatcatcgtcatg
gtgcccgacatcgacacctacgccccggccgtcgaggcggtgttcggacggctcgaccgc
cacgaccaccgctatatcccctataccatcggcgatcgtcgcgcgcgcagcgaagcgccc
gtggccacggccatcgaacggctcaccgatctgcccaatgcgcggctcacccttggcgag
gttctcgatctgctcgaggtaccggcgttccgccagcgcttcgggctcggcgaggaggat
ctgatcatcctgcgcgaatggtgccgcgacgccggcgtgcgctggggactggatgccgag
cgccgcgagtccctcgacatcgcccggggtttcgagcagaacagctggcgattcgggctt
cggcgcatgctgctcggatatgccgtgggagccggcgacgcctggcaggacatcgagccc
tacccggaagtgggcagcctggatgctgcactgctgggacctctgcgcgcgctgctcgac
acccttgagcatcacgcggcggcgttccgtgaacccggccgtccccgcgactgggcggac
cggttgagcgcgctgatcgacgactgcctgagcctgcagggcagcgaagaactggcactg
gagtcgcggctcgctgatgccatgaccgagtggctgaatgcctgtgacgaggcggccttc
aatgatcccatccccctcacggtcgcccgcgatgcatggcttgccgtgctcgaggacgaa
ggccccagccagcggtttctcgccggccgcgtcaatatctgcaccatgatgccgatgcgc
agcattccgttccggctggtctgcctgctgggcatgaatgacggtgaatacccgcgcacc
cggccgcccgtagactttgacctgatggccgccggtggtcagtaccgacccggcgatcga
tcgggacgcgatgatgatcgctacttgtttctggaggcgctgctggccgcccgtgaccac
ctgcatgtcagctggatcggacgcaatccgcgcgacgacagcgagctccccccctcggta
ctggtcagccagctgcgtgaccacctggaccgcgggtggcggctcgatgagcctgacacc
gacagcacggcggtgacgccgcatctcaccgtcgaccatcccctgcagccgttcagcccc
cgttatgacggccagggcgaatatttcacctacgccagcgaatggcggcacgacgcccgg
ccgatggacgaatcgccggcactcggcccgccgttactggcgtcaccgcaggccctcggc
ttacgtgatctggcgacgttcctcagcgacagcgccgggcattttgccggagagcggctc
aagctgcgctttgacgagacccgcgatgccacgcctgatagcgagcctttcgagctggcc
ggtctcgcccgttacagcgttcaggatgccctgctggcccccctgcggcggcaagacccg
cccgatgaccccgacccggccatcgccgccgccggggcacggctgcagcgcagcggtgaa
ttgccggtggccggcatgggccggatcgcgcttgatcagtccatcgcccaggcgctgcgg
gccgcccggcgctggcaggtctggcgagccagggggccagcgccggagccgcctcaggag
ctgcgactgagccgcgatgtcgacgatcagccctttgtcatcgaggactggagcgccgat
ctgtatcgactcgccgacggtgagcggctgcgtctggtgctcaaggccggcgacaccctc
aaggctggccacccgcactacccgcgcctgctcagcgactgggtgcagcacctggcgctc
aatgccgccggattcaacgcccgcagcgtcatcatcgcccacgatgccacccattccctg
ccggcaatgccctgcggatcggccgcagggcctctcgatgacatcctgcgcggctggcga
gccgggcttgaacgccccctgccgctgccggtacgcaccgtctttgccctgcttggacag
gcccccgacaagcccatcaatgccgggacggcacggccgcattacgaaggcacgactcgt
caccccggcgagatgacattcgcgggcaacggcgcattgcgccggtgttttcccgatgcc
gacgcgctgttcgagccgtccaccgacgccagcccccttttggttgcctgggccacccgg
ctctaccaaccccttatcgatgcactgatccgggaggatgggtcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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