KEGG   Spiribacter roseus: BBH56_05890
Entry
BBH56_05890       CDS       T06143                                 
Name
(GenBank) RNA degradosome polyphosphate kinase
  KO
K00937  polyphosphate kinase [EC:2.7.4.1]
Organism
sros  Spiribacter roseus
Pathway
sros00190  Oxidative phosphorylation
sros03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sros00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    BBH56_05890
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BBH56_05890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sros03019]
    BBH56_05890
Enzymes [BR:sros01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.1  ATP-polyphosphate phosphotransferase
     BBH56_05890
Messenger RNA biogenesis [BR:sros03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     BBH56_05890
SSDB
Motif
Pfam: PP_kinase_C_1 PP_kinase PP_kinase_C PP_kinase_N PLDc_2
Other DBs
NCBI-ProteinID: AUB78672
Position
1209133..1211211
AA seq 692 aa
MQSDNLHHPGLYLNRQLSLLAFNERVLAQAADDSNPLLERLKFLCIASSNLDEFFEIRVA
GLRQARELGVGQSGPDNRTPQQVLREISERAHALVDEQYRLLNDEVTPALAAADIRFLRR
NEWTQAQQDWIRSYFETELLPILSPLGLDPAHPFPQVLNKSLNFIISLEGKDAFGRSSGM
AVVQAPRALPRIIQLPPELDGGGTYDFVFLSSVIHAHVTDLFPGMKTTGCYQFRVTRNSD
LYVDEEEVDDLLRAMEGELPSRRYGDAVRLEVAANCPEHMAHFLLEEFELEPEALYQVNG
PVNLNRLFAVCDLVDRPDLKYPAFKPGLPAELSHTGDIFKVMRRRDILLHHPFESFAPVI
ELLRQSAQDPDVLAIKQTLYRTGPDSAVVDHLVTAARSGKEVTVVVELRARFDEAANIGL
ANRLQEAGAHVVYGVVGHKTHAKLMLIVRRESGRLRHYVHLGTGNYHSRTARLYTDYGLM
TTRPAIGEDVHRVFLQLTSLGKVSALSHLLESPFTLHPGILEKIAREQRHAEAGRPARII
IKVNSLVEPKVIRALYAASQAGVGIDLIVRGMCCLRPGVEGVSDTIRVRSVIGRFLEHTR
VFYFANNGDPELYCSSADWMERNFFRRVEAAFPLLDAELRDRVLADLQTYLADNTQAWVL
DADGEYRRLTPGADETGVSAQTALLQGYGEDG
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgcaatcggacaacctccaccaccccgggctctacctgaaccgtcagttgagcctcctg
gccttcaatgagcgggtcctcgcgcaggcggccgacgactccaatccgctgctcgagcgg
ctcaagttcctctgcatcgcaagctcgaacctggacgaattcttcgagatccgggtggcg
ggtctgcgccaggcccgggaacttggcgtgggccagagcgggccggacaaccggacgccc
cagcaggtgctgcgcgagatcagcgaacgcgcccatgccctcgtggacgagcagtaccgg
ctgctcaatgatgaggtcaccccggcgctggccgcggcggatatccgctttctgcgccgc
aacgaatggacgcaggcgcagcaggactggatccgcagctatttcgagaccgagctcctg
cccatcctcagcccgctggggctggatccggcgcatccgttcccgcaggtcctcaataaa
agcctcaacttcatcatctcgctggaaggcaaggacgccttcgggcgcagcagcggcatg
gcggtggtccaggcgccacgggccctgccccgcatcatccagctgccaccggagctcgat
ggcggcggtacctacgacttcgtgttcctgtcctcggtcatccacgcccatgtcaccgac
ctgttcccgggcatgaagaccaccggctgctatcagttccgggtgacgcgcaactcggac
ctgtatgtcgacgaggaggaagtggatgacctgctccgggccatggagggcgagctgcca
tcacggcgctatggcgatgccgtgcgcctcgaggtggccgccaactgccccgagcacatg
gcgcatttcctgctcgaggagttcgaactcgagcccgaggccctctatcaggtcaacgga
ccggtcaatctcaaccggctgttcgcggtctgtgacctggtcgaccggcccgacctcaag
tacccggccttcaagcccgggttgccggcggaactcagccacaccggcgatattttcaag
gtcatgcggcggcgcgacatcctgctgcatcaccccttcgagtcgttcgccccggtcatc
gagctgctgcgccagtcagcccaggatcccgacgtgctggcgatcaagcagaccctgtac
cggaccggccccgactcggcggtggtcgatcatctggtcaccgccgcgcgcagcggcaaa
gaggtgaccgtggtggtggagttgcgcgcccgatttgacgaggcggccaacatcgggctt
gccaaccggctgcaggaggccggtgcgcatgtggtctatggggtggtgggtcacaagacc
cacgccaaactgatgctgatcgtacgccgggaaagcggtcggctgcgccattacgtccac
cttgggaccggcaactaccactcacgcacggcccggctctacaccgactatggcctgatg
acgacccgcccggccattggcgaggacgtccatcgcgtgttcctccagctcaccagcctc
ggcaaggtctcggcgctcagtcatctgctcgagtcaccgttcaccctgcatcccggcatt
ctcgagaagatcgcccgcgagcagcgccacgccgaggccggccgaccggcccggatcatc
atcaaggtcaactcgctggtcgaacccaaggtcatccgggcgctgtacgcggcatcccag
gcgggtgtcgggatcgacctgatcgtgcgtggcatgtgctgcctgcgtcccggcgtcgag
ggggtcagtgacaccatccgggtgcgctcggtcatcgggcggttcctcgagcacacgcgg
gtgttctacttcgccaacaacggcgacccggagctctactgcagctcggcggactggatg
gagcgcaacttcttccggcgcgtcgaggcggccttcccgctcctcgatgccgagctccgc
gaccgggtgctcgccgatctgcagacctatcttgcggataacacgcaggcctgggtgctg
gatgccgatggtgagtaccgccgcctcacccccggggccgatgagaccggcgtgagcgcc
cagaccgcgctgctccagggctacggcgaggacggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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