KEGG   Streptococcus ruminantium: SR187_2555
Entry
SR187_2555        CDS       T05916                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
srq  Streptococcus ruminantium
Pathway
srq03030  DNA replication
srq03430  Mismatch repair
srq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:srq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SR187_2555
   03430 Mismatch repair
    SR187_2555
   03440 Homologous recombination
    SR187_2555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:srq03032]
    SR187_2555
   03400 DNA repair and recombination proteins [BR:srq03400]
    SR187_2555
Enzymes [BR:srq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SR187_2555
DNA replication proteins [BR:srq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SR187_2555
DNA repair and recombination proteins [BR:srq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SR187_2555
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N AAA_22 TIP49 AAA_5 AAA_30 AAA_assoc_2 AAA_19 AAA_24 AAA_14 AAA_7 FlxA AAA_16 GAS DNA_pol3_delta DivIC AAA_18 Syntaxin-6_N Myosin_tail_1 PIF1 TsaE Spc24 DUF6779 Mg_chelatase Get5_C DUF2680
Other DBs
NCBI-ProteinID: BBA92120
UniProt: A0A2Z5TL94
Position
486253..487923
AA seq 556 aa
MYQALYRKYRSQTFGEMVGQEVVATTLKQAIEQGKISHAYLFSGPRGTGKTSAAKIFAKA
MNCPNQVGGEPCNDCYICRAITEGSLEDVIEIDAASNNGVDEIRDIRDKSTYAPSLATYK
VYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHKIPATILSRVQRFEFKSIQVA
DIQAHLATILSKEGIAFDEQALMLIARRAEGGMRDALSILDQALSLSQSQEITLRIAEEI
TGSISLLALDDYVASIRQFDSITAIRHLQTLFDQGKSMSRFATDLLHYLRDLLIVQTGGE
NTHLTAGFIDNLTLQQDRIFSMIEMVTKGLADIKSSPQPKIYAEMMTIRLAEDGSNSREI
AELPADLTQQLATLQQQVAELQKQLSQLSSNQPMTIKPVSRKPQAQKKYRLDTSKIHAIL
QEAMENPVLARENLTRLQNAWGEIIESLSGADQALLVGSQPVAANENHAILAFDSPLNAE
QTMKRDNLNTMFGNILSKAAGFSPQILAIAQEDWIRVRAEFSAKAKGKKNQETEKAESSL
PEEFSFLAGAVEIVDD
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgtaccaagctttgtatcggaagtaccggagccagacttttggggaaatggtggggcag
gaggtggttgcaactacgctcaagcaagccattgagcagggaaagattagccatgcttat
cttttttctggacctcgtggtacggggaagacatcagcagctaagatttttgccaaggct
atgaactgtccgaatcaggttggaggtgaaccatgcaatgattgttatatctgccgagct
attacagaaggtagtctggaggatgtgattgagattgatgcggcatctaataatggtgta
gatgagattcgtgacatccgtgataagtcaacttacgcacctagccttgcgacttataag
gtctatattatcgatgaggttcacatgctgtctacgggagctttcaatgctcttttgaag
actctggaagagccaacagagaatgtggtctttattcttgcgacaacggagttgcataag
attcctgcgacgattctttcacgtgttcagcggtttgaatttaagtccatccaagtggca
gatattcaagcacatttggcgactattttatcaaaggaagggattgcttttgatgagcag
gccttgatgcttattgcacgtcgggcagaaggtggtatgcgggatgccttgtctatcttg
gatcaggctcttagtcttagccagagtcaagaaataacactaaggattgcagaagaaatc
acaggttcgattagtctgcttgctttggatgattacgtggcaagtatccgtcagttcgat
agtattactgctattaggcatctgcaaacgctatttgatcaaggaaagagtatgagccgg
tttgcaacggatttgttgcattacttacgagacttgctcattgtacagacaggtggggag
aacacccatctgacagcaggttttatagacaacctcacccttcaacaagatcggattttt
tccatgattgagatggttacaaagggacttgcggatattaagtccagtccccaacccaag
atttatgctgaaatgatgacaattcgtttggcggaagatggatctaattcaagggaaata
gcagagctaccagcagatttgactcagcagttggcaactttgcaacagcaggttgctgag
ctgcaaaaacaattaagtcaattatctagcaatcaaccaatgacgattaaaccagtctct
cgaaagccgcaagcgcaaaagaaatacagattggatactagtaagattcatgcaattttg
caggaagcgatggaaaatccagtcttggcgcgcgagaatttgacccgtctgcaaaatgct
tggggagaaatcattgaaagtttgtctggggcagaccaagctttgcttgtcggttctcag
ccagtcgcagcaaatgagaatcatgcgattttggcttttgactcacctctcaatgctgag
cagaccatgaaacgggataaccttaacactatgtttggtaatattcttagcaaagcagcg
ggattttcaccgcagattttagcgattgctcaagaggattggatccgtgttcgagcggag
ttttcagctaaagccaaagggaaaaaaaaccaagaaactgaaaaggcagaaagttctctt
ccagaagaatttagctttttagcaggtgcagtcgaaatagtggatgattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (40)   

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