KEGG T01503: SerAS9

Serratia plymuthica AS9: SerAS9_4146

Entry

SerAS9_4146       CDS       T01503

Name

(GenBank) pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

srr Serratia plymuthica AS9

Brite

KEGG Orthology (KO) [BR:srr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:srr03009]
    SerAS9_4146
   03016 Transfer RNA biogenesis [BR:srr03016]
    SerAS9_4146
Enzymes [BR:srr01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     SerAS9_4146
    5.4.99.29  23S rRNA pseudouridine746 synthase
     SerAS9_4146
Ribosome biogenesis [BR:srr03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SerAS9_4146
Transfer RNA biogenesis [BR:srr03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    SerAS9_4146

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

AEF47245

Position

4433723..4434421

AA seq 232 aa
MSKIIDTFIAPPCHDKIENLYQDESLVLINKPAGLLSLSGKNPQNLDSVHHRLVQIFPGC
TLVHRLDFGTSGLMVIARNKAINAALCQQFSQRTVTKVYSALLCGHLDDDEGVIDAAIAK
DPALFPLMSICATHGKPARSGYRVVERFYHELEGGTLLPVTRVQLTPETGRTHQLRIHCQ
LLGHPILGCDLYGGRLLPGTERIPRLMLHASELHFVHPIGKERIKARHASPF

NT seq 699 nt +upstreamnt +downstreamnt
atgtccaagattatcgatacctttattgccccgccgtgccatgacaagatcgagaatctc
tatcaggacgagagtctggtactgatcaataaacccgccgggctgctcagcctctcgggg
aaaaatccgcaaaatctggattcggtgcatcatcggctggtacagatatttcccggctgc
acactggtccaccgcctggatttcggtacttccgggctgatggtgattgcccgcaataag
gctatcaatgccgctctctgccaacagttcagccaacgaacagtgaccaaagtgtacagc
gcactgctctgcgggcatctggacgacgacgaaggggtgatagacgccgcgattgccaaa
gacccggcgctgttcccgttgatgtcgatttgcgcaacccacggcaagcccgctcgctcc
ggctatcgggtcgttgagcgcttttaccatgagttggaaggcgggacgttactgccagtg
acgcgggtacagctaaccccggaaaccgggcgcactcatcaactccgcatccactgtcag
ctattgggccaccctattttgggctgtgacctgtatggcggtcgcctgctgccgggtacc
gaacggatcccgcggctgatgctgcacgccagtgagctgcattttgttcaccccattggc
aaagagcggatcaaagcccgtcatgccagcccgttttga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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