KEGG   Serratia sp. AS12: SerAS12_0283
Entry
SerAS12_0283      CDS       T01502                                 
Name
(GenBank) conjugative coupling factor TraD, SXT/TOL subfamily
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
srs  Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:srs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:srs02044]
    SerAS12_0283
Secretion system [BR:srs02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   SerAS12_0283
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: AEF48397
Position
332098..334212
AA seq 704 aa
MSNRHVMEALLRPAVELNTAIVAGTAAVICFVAPWSVALAPEVSYVTAGSFAVLSAIRAR
QGMQVIRYRRNLRRLPRYVMTSAQIPVSRQRLFLGRGFRWQQKHIQRLMDTRRPEVEKYV
QPPQLYQMARRLELKTEYTLPWLSQLLRKDSALNPVRPLPPVGGNPAIHGIEPDELDVSM
DLRERVGHSLVLGTTRVGKTRLAELLITQDIRRGDITIVFDPKGDADLLRRVWAEAHRAG
RGDELFIFHLGWPDISARYNAVGRFERVSEVAGRISGQLSGEGNSAAFREFAWRFVNIVA
RALVALGQRPDYTLITRYVNNISELYETYAKKVIETRMPALQQQIDNNLKVLTEEDVPRN
MQGQPNAVKIFAVEMALSSEAGKQLYDPILDGLRSAVRYDRTYFDKIVASLLPLLEKLTT
GKTAELLAPNYMDMNDPRPIFDWEQVIRKQGIVYVGLDALSDGVVASAVGNSMFADLVSV
AGHIYKHGMHGGLPTRADGKLPINLHCDEFNELMGDEFIPLINKGGGAGMQVTAYTQTES
DIEARIGSTAKAAQVTGNFNTLIMLRVRENRTAQLLTTQLPEVDVYTKTLVSGHADTADV
EKGQDFTSSTQDRVGTVKTPLLMPADVINLPKGQAFALLEGGQLWKIRMPLPSGDGDDAL
MPPNLEKIAEEMQRNYRTSESWWSASTVMPDAVIKGGLNVTSGE
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgagtaatcgccacgtgatggaagcgttgctgcgcccggcagtcgaattgaatacagcg
attgtggctggcaccgcagctgtcatttgttttgttgctccctggtcggtagcgctggca
ccagaggtgagctatgtcaccgccggcagctttgcggtgttatctgccatacgagcccgt
cagggcatgcaggtgatccgctatcgccgcaatctgcgccggctgccgcggtatgtcatg
accagtgcccaaatcccggtcagccggcagcggttgttcctggggcggggttttcgctgg
cagcaaaagcacatccagcggctgatggatacccgtcgtccagaggttgagaagtatgtt
cagccgccgcagctgtaccagatggcgcggcgcctggagcttaaaaccgaatacacccta
ccgtggttatcccagttgctgcgcaaagactccgcattgaacccggtcaggccgttgcca
ccggtcggagggaacccggcaattcatggtattgagcccgatgagctggatgtttcgatg
gatttgcgtgaacgcgtgggccacagcctggtactgggtactacccgtgtgggtaaaacg
cgtctagctgagttgctgatcacccaggatattcggcgcggtgacatcaccatcgtgttt
gatccgaaaggcgatgcggacttgctgcggcgtgtctgggctgaagcccaccgtgccggc
cgtggggatgagctgttcatcttccatctgggttggccggatatctcggcacgctataac
gccgtcggtcgctttgaacgggtatcggaagtcgccggccgtatctccgggcagttgagt
ggggagggcaacagtgcggcattccgcgagtttgcctggcgattcgtcaacatcgtcgcg
cgtgccctggtcgcgttggggcagcgaccggactacaccctcatcacccgctatgtgaac
aacatcagcgaactgtatgagacctacgcgaaaaaggtcattgaaacgcgtatgccggca
ctgcagcagcagatagataacaacctgaaagtgctgacggaggaggacgtgccgcgcaac
atgcagggacaaccgaacgcggtcaaaatattcgctgttgaaatggccctgagctcggaa
gctggcaagcagctgtacgaccctatcctggatggcttgcgctcagccgtgcgctatgac
cgtacctatttcgataaaattgtagcgtccttgctgcctctgctggaaaaactcaccacc
ggcaagaccgcagagctgctggcaccgaactatatggacatgaatgacccccggccgata
tttgattgggagcaggtcatccgaaagcagggcattgtctacgtagggctggatgcgctg
tcggacggtgtggtcgcctctgccgtcggtaacagcatgtttgctgatctggtgtcagtg
gctggccatatctataaacacggcatgcatggcgggttgccgacccgtgccgacggcaaa
ctgccgatcaacctgcactgcgatgagtttaacgaactgatgggggacgaatttattcct
ctcatcaacaaaggcggtggcgccggcatgcaggtgacggcttacacgcaaaccgagtcg
gacatcgaggctcgcataggcagtaccgccaaggctgcccaggtgacgggtaactttaat
accctgatcatgctgcgcgtgcgagagaaccggaccgcacagctactgacaacacagctc
ccggaggtcgatgtctacaccaaaaccctggtgtcggggcacgccgatacggccgacgtc
gagaaagggcaggacttcacgtccagcacccaggatcgcgttggtacggtgaaaacgccg
ctgctgatgccggcggatgtgatcaacctgccgaaggggcaggcgttcgcgttgctggaa
ggcgggcagttgtggaaaattcggatgcccttacccagtggggatggcgatgatgcgttg
atgccacctaacctagagaagattgccgaggagatgcagcgcaattaccggaccagtgaa
tcctggtggtcagccagcacggtaatgcctgatgcggtcataaaagggggactgaatgtc
acaagcggtgaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (6)   

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