KEGG   Serratia sp. AS12: SerAS12_1233
Entry
SerAS12_1233      CDS       T01502                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
srs  Serratia sp. AS12
Pathway
srs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:srs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SerAS12_1233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srs03400]
    SerAS12_1233
Enzymes [BR:srs01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SerAS12_1233
DNA repair and recombination proteins [BR:srs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SerAS12_1233
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS NFACT_N
Other DBs
NCBI-ProteinID: AEF49323
Position
1348752..1349543
AA seq 263 aa
MPEGPEIRRAADALATAVIDQPLTEVAFAFPQLKHYRDRLIGERIIAIEPRGKALLTHFS
NGLTMYSHNQLYGVWKVVKAGEAPDTKRDLRVRLETAQQAILLYSASEITLGPREEIELH
PFLQRIGPDVLDMSLTVAMVAQRLLSPAFRRRQLGGMLLDQGFLAGLGNYLRAEILWQAE
LAPQHRPQDLAPETLQRLAQALLAVPRLSYQTRGQVDENRHHGALFSFKVFHRSGEPCER
CGAMIVRTQLSSRPFYWCPGCQK
NT seq 792 nt   +upstreamnt  +downstreamnt
atgccggaaggaccggaaattcgccgggcggcggatgcgctggctacagcggtgatcgat
caaccgctgaccgaggtcgcgtttgcttttccccagcttaaacattaccgcgatcggtta
atcggtgaacgtatcattgctatcgagccacgcggcaaggcgctgctgacccacttttct
aacgggctgacgatgtacagccacaaccagctgtatggtgtgtggaaagtggtaaaagcg
ggagaagcgccggataccaagcgcgacttgcgcgtgcggctggaaacggcgcagcaggcg
attttattgtacagcgcctcggagatcaccctgggcccgcgcgaagagattgagctgcac
ccgttcttgcaacgcattggtcccgatgtgctggatatgtcgctgacggtggcaatggtg
gcacaacggctgctgtcgccggcgtttcgccgtcgacaattgggtggcatgctgctcgac
caggggtttcttgccgggttgggcaactacctgcgcgctgaaattctctggcaggcggaa
ctggcaccacagcaccggccgcaggatttggcgccggaaacgctgcagcggctggctcag
gctttgctggcggtgcctcgcctgtcttaccagacgcgcgggcaggtggatgagaatcgt
catcatggcgcattgttcagctttaaggttttccaccgcagcggtgagccttgtgagcgc
tgcggcgcgatgattgtcagaacccaactgtcgtcacggccgttttattggtgccccggt
tgccaaaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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