KEGG   Serratia sp. AS12: SerAS12_4026
Entry
SerAS12_4026      CDS       T01502                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
srs  Serratia sp. AS12
Pathway
srs00300  Lysine biosynthesis
srs00470  D-Amino acid metabolism
srs01100  Metabolic pathways
srs01110  Biosynthesis of secondary metabolites
srs01120  Microbial metabolism in diverse environments
srs01230  Biosynthesis of amino acids
Module
srs_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:srs00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SerAS12_4026
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SerAS12_4026
Enzymes [BR:srs01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     SerAS12_4026
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: AEF52077
Position
complement(4307571..4308833)
AA seq 420 aa
MPRALHDTTTALNAANLLALPQRFGCPVWAYDAAIISERISQLRHFDVIRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALQAGFQPGGEPSDIVFTADVLDHATLARVSELKIPVN
VGSIDMLDQLGQVSVGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQAVVKIQQ
YGLKLIGVHMHIGSGVDYQHLERVCDAMVQQVIDLGHDISAISAGGGLSIPYQYGEEAID
TEHYFGLWNSARERIAAHLGHPVSLEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDA
GFNDLMRPAMYGSYHHISLLPADGRNTEHQPLRDTVIAGPLCESGDVFTQQAGGGIETRE
LPPVQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEKGEPRLIRRRQTIEELIALELI
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgccacgcgctttgcacgacacgactactgccctcaatgccgctaacctgctggccttg
cctcagcgttttggttgcccggtatgggcctatgatgccgctatcatcagcgagcgcatc
agccagttgcgccattttgacgtgatccgttttgcccaaaaggcctgctcgaatattcat
attctgcgcctgatgcgcgaacagggcgtcaaggtggattctgtctcgctgggcgagatt
gagcgtgcgttgcaggccggttttcagccgggcggtgagccaagcgacatcgtgtttacc
gccgatgtgctggaccacgcgacgctggcgcgcgtcagcgaattgaaaatcccggtgaac
gtcggctcgatcgatatgctggatcaactgggccaggtttccgttggtcatccggtgtgg
ttgcgtatcaacccgggctttggccacggccatagccagaaaaccaataccggcggcgag
aacagcaagcacgggatttggtatgccgatttgccgcaggcggtggtaaaaattcagcaa
tacggcctcaagctgatcggtgtgcatatgcatatcggttcgggcgtggattaccagcat
ctggagcgcgtgtgtgacgctatggtgcagcaggtgatcgatctgggtcatgatatcagc
gcgatttctgccggcggcgggctgtcgatcccctatcaatacggcgaagaggcgattgat
accgaacactattttggcctgtggaacagtgcacgcgagcgcattgccgcccatttgggc
cacccggtgagcctggagatcgagcctggtcgcttcctgatggcggaagccggggtgttg
gtcgccgaagtgcgtgcggtgaaagacatgggcagccgccactttgtgctggtggacgcc
ggttttaacgatttaatgcgtccggcgatgtatggcagctatcaccatatttctctgctg
ccggccgatggccgcaataccgagcatcagccgttgcgcgacaccgtgattgccgggccg
ctgtgcgaatccggcgacgtgttcacccaacaggccggtggcggcattgaaacccgcgag
ttgccgccggtgcaggtcggcgactatctggttttccatgataccggcgcctatggcgct
tcgatgtcttcaaactacaacagccgtccgctgctgccggaagtgttgttcgagaagggt
gagccacggctgatccgccggcggcagaccattgaagagttgattgcgctggaactcatc
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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