KEGG   Sinocyclocheilus rhinocerous: 107707092
Entry
107707092         CDS       T04916                                 
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03022  Basal transcription factors
srx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107707092
  09124 Replication and repair
   03420 Nucleotide excision repair
    107707092
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:srx03021]
    107707092
   03400 DNA repair and recombination proteins [BR:srx03400]
    107707092
Transcription machinery [BR:srx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107707092
DNA repair and recombination proteins [BR:srx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107707092
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_5 TRAF3_RING zf-RING_UBOX zf-UDP zf-C3HC4 zf-RING_2 UPF0113_N DUF604 zf-P11 TRAF6_Z2
Other DBs
NCBI-GeneID: 107707092
NCBI-ProteinID: XP_016366465
UniProt: A0A673GTK5
Position
Unknown
AA seq 309 aa
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVEMLFVRGSGNCVQCNTPLRKSNFRV
QLFEDPAIDKEVEIRKKVLKIYNKRELDFSTLKEYNDYLEQVEDIVFNLTNNIDVERTKQ
IMEQYQRDNKDIIQKNKAKLTREQEELEELLLQEQQDSEQKRLETLQEEQRQLQTKRKNK
QALLDELESSRLPAAVLLAQHKDRAVQLETQIEKQKQNVKPANIFSTGIMMGQTVSFASV
SRVEEVLYVYQPLCIDAYGPPVPELDQLGRLGYLNHVCTASPQDQAGGYTSGLACHRAIQ
DAFSGLFTL
NT seq 930 nt   +upstreamnt  +downstreamnt
atggatgatcagggatgcccgaggtgcaagacgaccaaatacagaaatccatccctgaag
ctgatggtgaatgtgtgcggacacacgctgtgtgagagctgtgtggagatgctgtttgtc
cgtggctcaggtaactgtgtgcagtgcaacactcctctcagaaagagtaattttcgcgtg
cagctcttcgaagatccagccatcgataaagaggtggagatccgcaagaaggttctcaaa
atctataataagagggaattagatttttccactctgaaagaatataatgactacctggag
caagtggaggatattgtgtttaacctgactaataacatagatgttgaaaggaccaagcag
attatggaacagtaccagcgagataacaaagacattatacagaaaaacaaagccaaacta
acacgtgagcaggaggagttggaggagctgttgttacaggagcagcaggattcagagcag
aagagactggagaccctgcaggaggaacagagacaactacagaccaagaggaaaaacaaa
caggccctgctggatgaactggaaagttccaggttacctgcagctgtgctgttggcccaa
cataaagatcgagctgttcaactggagacccagatagaaaaacaaaagcaaaatgtcaag
ccagcaaacatcttctctactggaataatgatgggtcagactgtttcttttgcttccgtg
tctcgtgtggaggaggtgttgtacgtctatcagcctctgtgcattgacgcatacgggccg
cccgttccagaactggatcaattgggccgattagggtatctgaatcatgtgtgcacagcg
tctccgcaggatcaggctggtggttatacatcaggactggcatgccatcgtgccatccaa
gatgctttcagtggcctcttcaccttatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system