KEGG   Sinocyclocheilus rhinocerous: 107708440
Entry
107708440         CDS       T04916                                 
Name
(RefSeq) probable tRNA pseudouridine synthase 1
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
srx  Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:srx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:srx03016]
    107708440
Enzymes [BR:srx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     107708440
Transfer RNA biogenesis [BR:srx03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    107708440
 Prokaryotic type
    107708440
SSDB
Motif
Pfam: TruB_N TruB_C_2 FlpD Pus10_C
Other DBs
NCBI-GeneID: 107708440
NCBI-ProteinID: XP_016368160
Position
Unknown
AA seq 301 aa
MPMTSSSRAVIAISMAIQNGSLSKLQSSFNGIFAIYKKQGPTSADVLNTLKKALLKEAGV
ANPNPRKRNKQPLKIGHGGTLDSNASGVLVVGIGEGTKMLTTMLAGSKKYRAVGELGKAT
DTLDVTGNVVEEKSYDHITKEAFEEKLKQFTGEIMQVPPLYSALKKDGKRMSVLLKQGQE
VEAKPARPVTVYSLSLQDFSPPYFTIDVECGGGFYVRSLVDDLAKALSSCAHIKELTRTK
QGQFTLEEHALKEDRWTLKDISQALQPCPNPSGQQKNAKKAKSKHKPTPSKSKGDDGDTN
D
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccaatgacgtcatcatctcgcgccgtgatagcaataagcatggctatacagaacggt
tcattatccaaattgcagtcttcttttaatggtatatttgccatttataagaaacagggt
cccacctccgcagatgtgttaaacacactgaagaaggcgcttttaaaagaggcaggtgtt
gcaaatcccaatcctcgcaaaaggaacaagcaacctttaaaaattggtcatggtggcacc
ctggacagcaatgcttctggtgtacttgtagttggaattggtgaaggaacaaagatgctc
accacaatgcttgcaggatcaaagaaatacagagctgttggagagttaggcaaagcaact
gatactcttgatgtcacaggaaatgttgttgaagaaaagagttatgatcacatcacaaaa
gaggcttttgaggagaagctgaagcagtttacgggtgaaattatgcaggttccacctcta
tattcagcactgaagaaggatggcaagcgcatgtctgtcctgctcaagcaaggtcaagag
gttgaggctaaacctgcacgtccagtcacagtctacagtctctctttacaagacttcagc
ccgccatatttcaccatagatgttgagtgtggaggtgggttttatgtcagaagcttggtt
gatgatcttgcaaaagctctgtcatcctgtgctcacatcaaggaactcactcggaccaag
cagggtcagttcacactggaagagcatgcattgaaggaggatcgctggactttgaaagac
atctcacaggctctgcagccttgcccaaacccatcagggcaacagaagaatgccaagaaa
gcaaaatcaaagcataagcccaccccatctaaatctaagggtgacgatggagatacaaat
gattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system