KEGG   Sinocyclocheilus rhinocerous: 107712928
Entry
107712928         CDS       T04916                                 
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like
  KO
K07532  Rho guanine nucleotide exchange factor 12
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx04270  Vascular smooth muscle contraction
srx04625  C-type lectin receptor signaling pathway
srx04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:srx00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    107712928
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    107712928
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    107712928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:srx04131]
    107712928
Membrane trafficking [BR:srx04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    107712928
SSDB
Motif
Pfam: RGS-like PH_16 RhoGEF PDZ PDZ_6 PH_13 PDZ_2 APAF1_C COG2
Other DBs
NCBI-GeneID: 107712928
NCBI-ProteinID: XP_016373815
Position
Unknown
AA seq 1365 aa
MRFPKKASRTGSILSKDHPPDKKPKSDKASVPPSHEFDPTGLVQRCVIIQKDENGFGLTV
SGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHVEVVKLIKSGSYVALTVLG
RPPGLPQIPLSDGEGEEGPLFSLTSPHSPGPIGPDRSSSSPSPSERKPTPLSVWAMTEEH
SRNPTPKLLKEIQDAKKHIPQHQEQLSKPSGTGQDGSLSPRPGEGEQEDRGGDLDRPPSW
QGDAGIEPAWTNNTTAPVTPSPVPESPCQRETPCHSPKTTPRDSLNSCPSPDAEDTPDLD
SQSSVGSPSTRPVAHIIGAEDEDFDTEQEQMNGQCSCFQSVDLLKSRPAHLAAFIHHVVS
QFDPAPLLCYLYAELYKQTSSKETRRILMDTFFIEKPASLKVTVPESIIADLERTAHSIN
AERKRPEPISEDVHRQYVQQLQDTLLPDIQKNLEDFRHKRSMGLTLAEAELARLDTERMR
DRVALEKERSCAEHIISKIEDVLLTSQATEEDKCSTMQFVILSYMKQLGVKVKESRGLEH
KPKLMNLFPKIKKSIKPEKDGSEEKSKKTRFPNVFPQRRPSRIDTSAISRALEPRQRQTK
PQLPLGAGEQADGSSPPVRSSQSSEGSDGTTALVTSPPYSAPAAQGTDSINRESEAGGLP
SSALPRLGDGVVPGDLQDSSSSNTHFDFSPCTLEHLLEEEAETDKTQDTGTPRPDRSRME
PLGSGEVQSEDDQCAEVELEPPNWQTLVSRDVLSTLTPQEIKRQEVINELFYTERAHVRM
MKVLENLFYQPLIREAILPPADIKNIFSNLEEIVQLHMSLTEQMTAVRKKNETALIDSIG
DDLLSWFSGEEEAKIKRAAGTYCSNQPFALELIKSKQKKDQRFNSFIQEAESNRHCRRLQ
LKDIIPVETQRLTKYPLLLENIAKYTGTNLDLTKRKMVHEGPLSWKVNKDKTIELYTLLL
EDILVLLQRQDEKLILKCHSKNLAGTAETKHIFSPIIKLSTVMVRSVATDNRSFFVLSMS
DNGAQIYELMAQTVSEQKTWQCLITQRADCMKTKLHNIIPLPQTDGEREAVELINSGVQK
LNKDSEPISLVSIQSPEKDGTEVMPTPPCSTNPFETKSDEEDEEEEEENSLQDQAEDDEA
FVVADMTDRLTFLKQRSRLGIAIDKDEAEAFELQPLRADEALRTLATLRQLLINHMSSQE
DTDRDIKRREQQEDVARTGSQQGAEDSTAIRSAVENGSERAENAQELPSGDTGFFETSED
CVSAGSYMVLEVYGGLGESSTDDDVQGSSGEPVAAGDSGIDLKKLLSSSSQSSGGPNLNR
QIMTHIRLLQANLQHLKDTEIKYNQLRQRLSEETATDTEENKDKS
NT seq 4098 nt   +upstreamnt  +downstreamnt
atgaggtttcccaaaaaagcgagcaggacaggaagtattctcagcaaggaccatccccca
gacaaaaagcccaaaagtgacaaggcgtcagtccccccctcgcatgagtttgaccccaca
gggcttgtgcagcgttgtgttatcatccagaaagatgagaatggctttgggctgacagtg
agcggcgataaccctgtgtttgtacagcttgtaaaagaggatggagctgccatgcgagct
ggtgttcagacaggtgaccggatcataaaggtcaatgggacattagttacacattcaaat
catgtagaagttgtaaagctaataaaatcgggctcctatgtggccctgacagtactgggg
agaccgccaggcctgcctcagatccccctctcagacggcgagggggaggaggggcctctc
ttctcactcacctcccctcactccccggggcccatcggtccagaccgctcgtcttcctcc
cccagcccctcggagcgcaaaccgacccctctgtctgtatgggccatgacggaggagcac
agcaggaaccctacacctaaactactgaaggaaatccaggacgccaagaagcacattcca
cagcaccaggagcagctcagcaagccctctgggactggacaggatggctccttatctcca
aggccaggagaaggagagcaggaggatagagggggagatttggatcggcccccttcatgg
cagggcgatgctggaattgagccagcgtggaccaacaataccacagcccctgtcactccc
agtcctgtcccagagagtccatgccaaagagagaccccctgccacagcccaaagaccaca
ccccgagacagcctcaactcttgtccttcaccggatgccgaagacacacctgaccttgat
tcgcagtcgagtgtggggagcccctccactcgtccggtagcacacatcattggtgctgag
gacgaagactttgacacagagcaggaacagatgaatggccagtgtagctgttttcagagc
gtagacctcctgaaatctcggcctgctcacctggcagctttcatccatcatgtggtctct
cagtttgaccctgcgccgctgctgtgctacctctatgctgaactttacaaacagaccagc
tccaaagagacacgacgaatcctcatggataccttcttcatagaaaaaccagctagcttg
aaagtaacagtgcccgaatccatcatcgctgacctggaacggactgcacactcaattaat
gcagaacggaagaggccggagcccatctcagaggacgtccaccggcaatatgtgcagcag
ctgcaggacacactactacctgacatccagaagaacctagaagacttcaggcacaagcgc
agtatgggtctgaccctggctgaagcagagctagcccgtctggatacagagagaatgaga
gaccgtgtggctttggaaaaagagcgatcctgtgcagagcacattatctctaagatagag
gatgtactattgacgtcacaggccacagaggaagataagtgtagcaccatgcagtttgtg
atactgtcgtatatgaagcagctcggcgtaaaagtgaaggagtctcgagggctggagcac
aagcccaagctaatgaatcttttccctaaaataaagaaaagcataaagcctgagaaagat
ggaagtgaggagaaatcaaagaaaacacgatttcctaatgtctttcctcagagacggccg
agcaggattgacacttcagcaatcagcagggctctggagccgaggcagcgtcagacaaag
cctcagctgccgttgggcgctggagagcaggcagacgggtcgtctcctcccgtacggagc
agtcagtcgagtgaaggctcagatggcaccactgccctggtcacgtcacccccttacagt
gctccagcagcacagggcacagacagcatcaaccgagagtctgaggctggtggacttccc
tcttctgcactacctagactgggagacggtgtcgtcccgggagatctgcaggactcgtcc
tcttcaaacactcactttgacttcagcccctgtacactggagcatctactggaggaggaa
gctgagacagacaagacgcaggacaccggcacccccaggcctgacaggagcaggatggag
ccgctgggctctggagaggtgcagagtgaagatgatcagtgtgctgaggtagagctagag
cctcctaactggcagacgctggtgagcagagacgtcctgtccacacttacccctcaggaa
atcaagagacaggaagtcatcaacgagttgttctacacagagagagcacacgttcgaatg
atgaaggttctggagaatttattttaccagccgctgatccgagaggccatcctccctcct
gcagacatcaaaaacatcttcagcaaccttgaggagatcgttcagcttcacatgtcttta
acagaacaaatgactgcggttcggaagaaaaatgagacggcgctcattgactcaatagga
gatgatttgctttcctggttcagtggagaagaagaggcgaagatcaagagagctgcgggc
acgtactgcagtaatcagcctttcgccctggaactcatcaagagcaaacagaagaaagac
cagcgcttcaactccttcatacaggaggcagagagtaaccgacattgtcgcaggctacag
ttaaaggacattattcctgtggagacacaaagactcacaaagtatcccctcctgctggag
aacatcgccaaatacacaggtacaaacctggacttgactaagaggaagatggtgcatgag
ggaccactgtcctggaaggtcaacaaagataaaactattgagctgtacacattgctgctg
gaggatatattggtgctacttcaaaggcaagatgagaagctgatcttaaaatgccacagt
aagaatctggcgggcactgctgagaccaaacacatcttcagccccatcatcaaactcagc
actgtgatggtgcgctcggtcgccaccgacaacaggtcattctttgtgctctctatgtct
gataatggagcccagatctatgaactaatggctcaaaccgtatctgagcaaaagacgtgg
cagtgcctgatcacacaaagagccgattgtatgaagaccaaactacacaacatcattcca
ttacctcagactgacggggaacgtgaagcggtcgagttaataaactctggtgttcagaaa
ctaaacaaagactctgagcccatttctttagtgagcattcagtctccagaaaaagatgga
accgaggtcatgccaaccccaccatgtagcaccaacccatttgagaccaaatctgatgag
gaggatgaagaagaagaagaggaaaactcactacaggatcaggctgaagatgatgaggcg
ttcgtggtggccgatatgaccgatcgacttacattcctgaagcagcgctcgaggctgggc
atcgccatagacaaggacgaggccgaggccttcgagctccagccactcagagctgatgaa
gctctcagaacactggcaacactaaggcagctcctgatcaaccacatgtccagtcaggag
gacacagacagagacatcaagaggcgagagcaacaggaagatgtggcgaggacaggctct
cagcagggggctgaggacagcactgcgatcaggtccgctgttgagaatggctcagagagg
gctgagaacgcacaggaactgccctccggagacacaggcttctttgagacgtctgaggat
tgtgtctctgcaggcagttacatggtgctggaggtgtatggaggcttgggcgagagcagc
acagatgatgatgtgcagggcagcagcggggagccggtggccgcgggagactcaggtatt
gacttgaagaagctcctctcttcctcctctcagagcagcggaggaccaaacctcaacaga
cagatcatgacacacatacgtctactacaggccaacctgcagcatctgaaggatacagaa
atcaagtataaccagctacgccaaaggctatcagaggaaactgctactgacacagaggaa
aacaaagataaaagttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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