KEGG T04916: 107712997

Sinocyclocheilus rhinocerous: 107712997

Entry

107712997         CDS       T04916

Name

(RefSeq) protocadherin-20-like

K16498

protocadherin delta 1

Organism

srx Sinocyclocheilus rhinocerous

Brite

KEGG Orthology (KO) [BR:srx00001]
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:srx01009]
    107712997
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:srx04515]
    107712997
Protein phosphatases and associated proteins [BR:srx01009]
Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107712997
Cell adhesion molecules [BR:srx04515]
Cadherins
  Protocadherins
   107712997

SSDB

Motif

Pfam:

Cadherin Cadherin_2 Cadherin_3 FAM176 DUF4139 TM_ErbB1

Other DBs

NCBI-GeneID:

107712997

NCBI-ProteinID:

XP_016373900

Position

Unknown

AA seq 883 aa
MWNTKRATRLHSKGELWGLFILLLYTSPLSCSSNFSHLIYKIKEGLPKGTLIGAISADLK
LDLSVNPPRSFNLELKTASQQYVNLNNTTGELFTSAVEIDREALCAESHEGQGCAISLDV
LILPQQYFQLVKVKIIIEDVNDNHPHFPVDEIRVSVPENAPVNARFAVEQSAVDPDIGIH
SVQTYWLVNDYGVFTLDVEENEGGELTPFLIITEYLDRETQAEYVTDIIAEDGGSPPLLG
TATLRIIITDVNDNCPKFTESQVNVTLYGNATNGMQLARLQAYDPDEGANALITYTFSER
VTQESRNLFHLDTNTGVLKLAGKIDNNTGKLYKLIVLANGPTCIPEVATVTVHVIKQLSG
PPVVIPRYIASEKDGVVSINESEPPFSPIALFTIKNTEPQQKIECFLEGTGPFRLVPYER
FKNEYLLETTELLDYEQQQDYEMAVVVRNSRGLVVNTVVKVHVLDVNDNAPVFKQSFIDV
TVEENNPPNTFLAQLQATDADSESRGEVYYLLGADAPTIFDLDRSTGVLIVSTSLDREEK
ETYRFMVRAVDRGTPRKESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGEIGALT
VTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTTLDREQQGKYYVWIEAIDGGEPAL
SCITMVTVLLLDVNDNPPTVLFPQSNQSYMLVLPNTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRTDGEPGSFDIDPYTGNITLRKALSNRGLYSLWVKVRDHGQPELYSTVLVNLFVNE
TVSNETLIQSLLPRSVDIDHGELPPDKEGRKGEQVPNLCGEYQVLLLALTVTCLGLFLTV
LALVAFICCKKRKPKKKRLDSEIPLNLINQETMDKSLMEISNI

NT seq 2652 nt +upstreamnt +downstreamnt
atgtggaacactaaaagagcaacccgccttcacagcaaaggagagttatggggtttgttc
atcctcctcttgtacaccagtcctctctcctgctcgtcaaatttcagtcacctcatctat
aagataaaagaaggattacctaaagggacactcataggggctatcagtgcggacttaaaa
ttggatctttccgtcaatcctcctcgctcattcaatctggagctaaagacggccagccag
cagtacgtgaatctgaataacacgacgggggagctgttcacatctgctgtggagattgac
agagaggctctgtgcgcggagtcccatgagggccagggctgcgcaatctctctggacgtg
ctaatccttcctcaacagtactttcagctggttaaggttaaaatcattatagaggatgtg
aatgacaatcatccgcatttccctgtcgatgaaatcagggtgtctgtgccggagaacgca
cctgttaacgcaaggtttgcggtggagcaatccgcagtggatcccgacatcgggattcac
agcgttcaaacatactggcttgttaatgactatggtgttttcacattagatgtagaggag
aatgaaggcggtgaactgacgccctttctcatcattaccgagtatcttgatagggagacg
caagctgagtatgtgactgacattatagccgaggacggaggctctccgccgcttctaggc
actgcaactctgaggattatcatcacggatgtcaacgacaactgccccaagtttacagag
tcgcaagtgaacgttactctttacggaaacgctactaacggcatgcaactggctcgtcta
caagcctacgatccagacgagggagccaacgccttgatcacgtataccttcagcgaacgg
gtcacccaggaaagcagaaacctgtttcatttggatacaaacactggggttcttaaacta
gcaggaaagattgacaacaacaccggaaaactctacaaactaatcgtgctggccaatggg
ccgacttgtattccagaagttgcaacggttaccgttcacgtcattaaacagctctccggc
cctccggtggttatcccacgttacattgcttctgagaaggacggtgttgtgagtataaat
gagtcagagccaccgttttcacccattgctttgtttaccatcaaaaacactgagccacaa
cagaagatagagtgttttcttgaaggtacaggtccatttaggcttgtaccatatgagcgt
tttaaaaacgagtacctgcttgagaccaccgaactattggattatgagcagcaacaggat
tatgaaatggctgttgtggtacgtaactcacgtggattagtagttaataccgtagtgaag
gtccatgtgttggacgttaacgataatgctccggttttcaagcaatccttcattgacgtc
acagtggaggagaacaacccaccaaatacgttcctcgctcagcttcaggccaccgatgca
gacagtgaaagcagaggtgaggtgtattacctactcggtgccgacgctcccaccattttt
gacttggatcggtcaaccggggtactgatagtgtccacttctcttgaccgagaggaaaaa
gagacgtaccgattcatggtgcgggccgtagaccggggcacgccgagaaaggagtcaatc
gccactgtgattatcaccgtccaggatcgcaatgacaacagtccgcggttcatcaacaag
gacttcaccttctttgtgccggagaactttccaggttttggggaaattggcgctcttact
gttacggatgcagatgctggggagaacggctgggtggcgttgtccattcttaatgggagc
gacatcttcgtaattgacaccggacgaggagcgctgcgggccaagaccactctggaccgg
gagcaacagggaaagtactacgtttggatcgaggcaattgacggaggcgaacctgctctt
tcttgcatcacaatggtgactgttctcctcctggatgtcaacgacaaccctccaactgtt
cttttcccccagtccaaccagtcgtacatgttagtgcttcccaacacacttccaggaact
tctataacggaggtttacgcggtggaccgggacacggggatgaacgctgttattgcgtac
agcatcatcaagagaacagacggagagccgggctcatttgacattgacccctacacggga
aacatcaccttgaggaaagccttgagcaatcgaggcctctacagtttgtgggtcaaagtc
agggaccacggtcaaccagaactctactctaccgtactggtcaacctgtttgtgaacgag
acagtcagcaatgagaccctcattcagagtttgttgcccagaagtgtagatattgaccat
ggtgagcttcctccagataaggaagggaggaagggtgaacaagtgccaaatctgtgtggc
gagtaccaagtgttactgcttgcactgacagttacctgcctgggattgtttctgaccgtt
ttggcgttggtggcgttcatttgctgcaagaaaagaaaaccgaaaaagaagaggttagac
agtgagattcctttaaatctcatcaaccaagaaacgatggacaagagcctaatggagatt
tcaaacatctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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