KEGG   Sinocyclocheilus rhinocerous: 107715364
Entry
107715364         CDS       T04916                                 
Name
(RefSeq) nuclear RNA export factor 1-like isoform X1
  KO
K14284  nuclear RNA export factor
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03008  Ribosome biogenesis in eukaryotes
srx03013  Nucleocytoplasmic transport
srx03015  mRNA surveillance pathway
srx05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107715364
   03015 mRNA surveillance pathway
    107715364
   03008 Ribosome biogenesis in eukaryotes
    107715364
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107715364
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srx03019]
    107715364
   03009 Ribosome biogenesis [BR:srx03009]
    107715364
Messenger RNA biogenesis [BR:srx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107715364
   mRNA cycle factors
    Stress granule specific factors
     107715364
Ribosome biogenesis [BR:srx03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    107715364
SSDB
Motif
Pfam: Tap-RNA_bind TAP_C NTF2 LRR_8 LRR_9 LRR_4
Other DBs
NCBI-GeneID: 107715364
NCBI-ProteinID: XP_016376969
Position
Unknown
AA seq 636 aa
MATADDSRYYNEHDDRVGGPKHRNRKGRGPFRAPLYSDQISRPRRGGGGGGPGPRSRLQD
NDGDVTMAEGPQDSGSQRRFNPYGRPQNRQNRKGGRGGGGGNGSGGGNDDRGGNRYGGRS
GGGGGGSDGGRKNWFKMTIPFGKKYDKDWLLSSLQSVCSMPFHAVHYHTDGNKAQFYVED
STTANALFKVSRKITDKEGYKVTVIMNSCPPPTLIYTDLKAADLEHLKQCMAKRFDGSQQ
ALDLNNIRVDPDLVSQNIEVTLNRRNSMLAVIKIIEENIPELICLNLSNNRLYRLDDLVD
IVNKGPNLKILNLSHNELKTERELDKLKGLKLVELSLEGNPLCGHYKNQADYVSAIRERF
PKLLRLDGHDLPPPIVFDLEVAPATLPPCKASYFCSEEIKNIILCFLQQYYSIYDSGDRQ
PLLDAYHDGAAFSLSIPFTLQNPSKSSLGEYQKDSRNIRRMKDDPTTRFRLIKHTRLNVV
AFLNELPKTQHDIASLIVDVNTYTATLLAFTVSGVFKEIDGKSRDSFRAFSRVFIAVPAG
NAGLCIVNDELFIRNATTEEIRRAFVAPAPTPSSSPVPTLSAPQQEMLAAFSQKSGMNLE
WSQKCLQDNDWDFDRAAQIFTGLKAQGKIPDVAFVK
NT seq 1911 nt   +upstreamnt  +downstreamnt
atggcgacagcggacgactcgcgctactataatgagcatgatgaccgtgttggtggacca
aagcaccgtaatcgtaaaggcagaggccctttcagagcccccctgtacagcgaccagatt
tctcgaccgagacgtggaggaggaggaggaggccctggtcctcggtccagacttcaggat
aatgatggagatgtgaccatggcagaaggtcctcaagacagtggctcccagcgcagattc
aatccatatggccggccacagaatcgccagaatcgcaaaggtggacgtggtggtggcggc
ggcaatggcagcggaggtggaaatgacgatagaggtggtaatcgatatggaggcagaagt
ggtggaggtggcggtggttctgatggaggccgcaagaactggtttaaaatgactattcct
ttcggcaagaaatatgacaaagattggcttttgtcttcgcttcagagcgtctgttccatg
ccattccatgccgttcattatcacactgatggcaacaaggcccagttttatgttgaagac
tccacaactgctaatgctttgtttaaagtgtcacggaaaataacagacaaagaaggatat
aaggtgactgttattatgaacagctgcccaccacccactttgatttacactgatctgaag
gctgcagatctggagcatttgaagcaatgcatggccaagcgctttgatgggtcgcagcag
gctcttgatctgaacaacatcagagtcgatccagatttggtttctcaaaatattgaagtc
actttgaatcggagaaactccatgttggcggttatcaaaataattgaggagaacattcct
gagctgatttgtctgaacctgagcaacaaccggttgtacaggctggatgacttggtagat
attgtcaacaaaggtcccaacttgaagattctcaatctgtcgcataatgagctgaagaca
gagagagagcttgataaattgaagggtctgaagctggtggaactctcattggaaggaaat
ccattatgtggacactacaagaaccaggccgactatgtcagtgccattcgggaacgattc
cccaagctgctcagactggatggacacgaccttccacctcccattgtttttgatttggaa
gttgctcctgcgactcttcccccctgcaaggctagctacttctgctctgaagaaatcaag
aacatcatcctttgcttcctgcaacagtattacagcatatatgactccggagacagacag
cccctgctggatgcctaccatgatggggcagctttctccctcagcattcccttcaccctg
cagaacccttcaaaaagtagtttaggggaatatcagaaagacagtcgcaatatcagacgt
atgaaagacgaccccactacacggtttcgtttgattaaacacacaagattaaatgtggtg
gctttcctgaacgaactccccaaaactcaacatgacatcgcctccttgatcgtagacgtc
aacacctacacagctacattgttggcatttacagtcagtggagttttcaaagagatagat
ggcaaatcccgagactcattcagagccttctcccgggtgttcatcgctgttcctgctgga
aatgctggtctgtgcattgtgaatgatgagctcttcattcgaaatgccactacggaggaa
atccgacgtgcgtttgttgctccagcccccacaccgtccagcagccctgtgcccactctg
tctgcccctcaacaagaaatgcttgctgccttctcccaaaagtctggcatgaacctagaa
tggtctcagaagtgcctacaagacaacgattgggattttgacagggctgctcagatcttc
accggccttaaggcgcaaggaaagatcccagatgtcgcattcgtcaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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