KEGG   Sinocyclocheilus rhinocerous: 107723650
Entry
107723650         CDS       T04916                                 
Name
(RefSeq) collagen alpha-3(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx04510  Focal adhesion
srx04512  ECM-receptor interaction
srx04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:srx00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107723650
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107723650
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107723650
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:srx04147]
    107723650
   00536 Glycosaminoglycan binding proteins [BR:srx00536]
    107723650
Exosome [BR:srx04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107723650
Glycosaminoglycan binding proteins [BR:srx00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107723650
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   107723650
SSDB
Motif
Pfam: VWA VWA_2 Collagen Kunitz_BPTI VWA_3 TssR_VWA CPP1-like fn3 DUF5446
Other DBs
NCBI-GeneID: 107723650
NCBI-ProteinID: XP_016387844
Position
Unknown
AA seq 2368 aa
FFAIDTVRGLRHKGGRPLNTGAALQYVRDNVFTASSGSRRVEGVPQLLILLSGGRSFDNV
DTPASSLKELGVLIFGIGSRSSDSRELQRISHEPSYALSVSDFADLPGVQQQLFTNINTV
LVERTPITTTVIVESQGPKKDIIFVIDGSEGVGREFPIIQEFVRSVVENLNVGENKIRVG
VVQYGDSPYADIYLNSHRTKEGVLNGIKELRQRGGKQRNLGRAIDFVSHEVLASGRGGRK
QEGVPQFVVVISGGKATDNIRPSATALKQSGVVPFSIGTRDVDTQELQVTSYVPRFTYTV
EDLPGLYAIQDTLITTLTELSSEELAKLRPVYPPETVIPVPVPRGDKRDVVFLIDGTTKM
RSEFPAIRDMVQRVVEKLDVGLDNVRVSVVQYSDDPKLEFLLNEHSTKEEVRQAIRRMRS
KGGNQLNTGQALEYVSKNIYQRSAGSRVEEGVPQFLILVTGGKSNDDVSGPANQLKSSRI
APIAVGAHNADEEELKLISFSPELTYTIRDFQQLPRVEQQLLTKVSTMTRDEISAPPTPR
VPLSLGRKDIIFLIDGSDSVGQSGVAHIRDFILKVVDQLDVQPDQVRVALVQYGERPKTE
FSLNSHDNKQSVISAIKRLRHMGGRGADLAEAIKFVIRNELQASAGVRLNQASQHLVVLT
GGRSTSDVSTYGPLLKGSRVNCIGIGAENADPGQLAQITTTADDVLQVAAFPNLPNIQSK
FIARLNGTITEETPTPTPTDELDPGLPQAKAADIVFLVDGSINLGRDNFKEVMEFILNLI
DLFFTERDNLQIGLAHYATDVTDVFYLNTYKNKDDIINAITRAEYKGGREIKTGNAIRHV
QKTQFVKERGSRKDAGIPQILMVVTGGRSRDDSKSAALALKDSGVRIYAVGVGDIEDELN
NLGSEATTVARASTFQELSELNEQILETLDDEVKGIGLCTGVKVTTRECKLDVLVGFDVA
AQNIFAAQKTLETKVATILQRITQMQPISCTSGQVPLIQVGMLAMDSASEPVQLDFTNRY
TELIEPFKALRNRGPFVLNGATIKAYADRFKSQPSDSVKVVIHLTDGLDAQYNILKERVE
LMRSAGVSSFILVALERVPRFEDAVLLEFGRGFRYTRPLRVNLMDLDYELLEELDNIAER
ECCSVPCKCNGQRGDRGAVGVPGSKGQSGGQGLRGHPGDEGGPGERGPPGVNGTQGFQGC
PGQRGVKGSRGYNGEKGEIGEIGLDGINGEEGTSGIAGPPGDRGNPGQRGPKGAKGQAGD
VGQTGIRGDPGIPGRDNNQRGPKGDPGDAGPPGEPGVDGNKGGPGEPGRRGPDGRRGPPG
QAGAPGRAGSDGLPGETGIGGSRGAAGPIGAPGIRGEDGNPGPRGPGGLPGTAGEKGRRG
ALGRKGEPGEPGPKGVVGPLGPRGEPGEDGRDGFGIPGPKGRKGDEGFPGFPGPKGEAGD
PGSKGGPGPRGNNGQRGTSGEPGGPGQKGDIGYPGPYGLKGSRGTGPVQCDLVKKIRDNC
PCCYGAQECPLYPTELAFALDASDGVSRSAFNNMRDTVLRLVSDITIAESNCPRGARVAL
ALYNNEVTTELRFADTQKKRSLVERVQGLQTQQTRKQRSLETAMNFVAQNTFKRVRSGFL
VRKVAVFFVNGPVTVAQEFSAAALRLYDAGISSVFLLNREDRQLTRALQLNNTALAQTIV
LPSPGSAEYNNVIKKIMTCHICLDFCAPDEMCNYVPHRGARDRRDPTTDLDIDMVFVLDS
SESTWPSVFTEIKQYVSLMIEQLEMSPEPANTTHHARVALVQHAPYEYLHNGSGMPISVT
FGLTDHKSPNSVRSFLLDKVHQLEGGRALADALEGTVEHVFEKVPHPRHLKVLVILVTGP
VELHEERIIRAATEVKCKGYFIVVMAVGKLFSTGDVRVLAQVASEPSDVFFKRVDRPSGF
YDDHIQTFARLLPKYLGLENAFYLSPEVSKKCQWYQSDQPHKFPFSLPKTEEKHQKHHGQ
QEVHDRKHKETGMEKMHLVNVTSSGFSLQWLSGDSKATHEVTVTRLKDHSLVLRKNVTGS
HLSISELEAAETYHVVVNTHSVNGHVASTYKGIVPTKSAHMKVLTVSDVMGIVPTAPLSK
PETKSAEQKILNASKMMVMMSTAPLSKPEIKSAEQKVLTPREVMGIAPSAPLSKPEIKSE
EQKVLIPSEVIGIAPSAPSSKADIKTAEQKAPSEAMGIVSSAPLSKPEIINNPMDPCSLD
FDTGLPCKDYQAKWYFDRKNGFCTQFWYGGCGGNDNRFETEADCLKRCMKPVAEPKASEE
HVKAVLPPAPAPAALRSSVYICKLPKEEGSCAKFVLKWHYDPLSGNCTRFWYGGCGGNQN
RFDTQDECEKACGKAAPVKRGIIAAVNT
NT seq 7109 nt   +upstreamnt  +downstreamnt
gtttcttcgccattgacacggtcaggggtctgaggcacaaaggagggagacccctcaaca
cgggggcagctctgcagtacgtgagggacaatgtattcactgcctcctctggaagcagac
gtgtagaaggtgtgccccagttactgattctgctgagtggtggaaggtcatttgataatg
ttgacacaccggcctcatccctgaaggagctgggagtgcttatctttgggatagggtcaa
ggagctcagacagcagggaactccagaggatctcccatgagcctagttatgcactctcag
tgagtgactttgctgaccttcccggtgtccaacagcagcttttcactaacattaatacag
tacttgtagagcgcacgcccatcactactacagtaatagttgagtcccaaggacctaaga
aggacatcatctttgtgattgatggctctgaaggtgttggcagagaattcccaattatcc
aggagtttgtgcgcagcgttgtggagaacctcaatgttggcgagaacaagatccgagtag
gcgtggtgcagtatggagattccccgtatgcagacatatacctcaactcacacaggacca
aagaaggtgtcctaaatggcattaaggaactccgacaacgaggggggaaacagcgtaacc
ttggtcgagccattgactttgttagtcatgaagtcctggcttctggacgtggtggaagga
aacaggagggagttccacaatttgttgttgtgatttcaggaggaaaagcaacagacaata
taagaccatctgctactgcactgaaacagtcaggagttgtcccttttagcataggaacaa
gagacgtggacactcaggaattgcaggtgacatcctatgtccccagatttacctacacag
ttgaagacttgcctggactatatgcaattcaggacacactcatcaccaccctgacagagc
tatctagtgaggagttagccaaattgcgccctgtataccctccagagactgtaattccag
tgccagtacctcgtggagataaaagggatgttgttttccttattgatggcacaacaaaga
tgcggagtgagttccctgccataagagacatggttcagcgagtggtggagaagttagatg
tgggtctcgacaatgtgagagtttcagttgtgcagtacagtgatgatcccaaactggagt
ttcttctcaatgagcactccaccaaggaggaagttcgccaggcaatacgaagaatgagaa
gcaaaggtggcaatcagcttaacactggccaagctctggaatacgtttcaaagaacatct
atcaaagatcagccggaagtcgtgtagaagagggtgtgccccagtttctcatcttggtaa
ctggaggaaagtcaaatgatgatgtgtctggccctgctaaccaactgaagtcaagccgca
ttgctcccatagcagttggagcacataatgctgatgaagaggagctaaaattaatttcct
ttagtccagaactaacatacaccattagagacttccagcaacttccaagagtggagcaac
agcttttaaccaaagtcagtaccatgaccagagatgaaatttcggccccccctacgccta
gagtcccactcagtcttggaagaaaggacatcatcttcctcattgatggctctgatagtg
ttggacaaagcggtgttgctcacattcgtgactttatcttgaaagtggttgatcagcttg
atgtacaacctgaccaagtccgtgtggctcttgtgcagtatggtgaaaggcctaaaacgg
aattctctttgaactctcatgacaacaagcaatctgtcatctctgcaattaagagattgc
gtcatatgggtggacgcggtgctgatctagctgaggcgataaagtttgtcattcgaaacg
agctccaggcatctgctggggtacgtctaaaccaggcttcccagcatttagttgtgctaa
ctggtggaagatcaacctccgatgtatctacttatggcccacttctcaaaggctctcgcg
tcaattgtataggaattggtgcagaaaatgcagacccaggacagctggcacagattacta
ccactgctgatgacgtcctgcaggtggctgctttcccaaatcttccgaacatacagagca
agtttatagccagacttaatggaacaattacagaggagactcccactcccactcccactg
acgagctagatcctgggctcccacaagccaaggctgctgacattgtgtttttggttgatg
gatcaataaatcttggcagggacaattttaaagaggtcatggaattcattcttaatttaa
ttgaccttttcttcactgagagagacaatcttcagattggtctagcacattatgctacag
atgtgaccgatgtattctacctcaatacttacaaaaataaggatgacattattaatgcca
taactcgagccgagtacaagggaggtcgggaaattaaaacaggcaatgccattcgccatg
ttcagaaaacacaatttgtcaaagaaagaggcagtcggaaggatgcgggaattccacaga
tcctgatggtagtcactggtggacggtcaagggatgacagcaaatcagcggcactagctc
tcaaagacagtggtgtgcgcatctatgctgttggggtgggtgatattgaggatgagctca
ataatttgggcagtgaagctactacagtggcccgagccagcaccttccaagaactctctg
aactgaatgagcagattttggaaacactggatgatgaggtgaaaggaataggactgtgca
ctggagtaaaggttaccacaagagaatgcaagttggatgtacttgtggggtttgatgtgg
ctgcacagaacatctttgctgctcagaaaacattagagacgaaggtggctactattctcc
aacgcattacccagatgcagcccatcagctgcacttctggccaggttcccttaatacaag
tgggcatgctagcaatggactctgcctctgaaccagttcaactggacttcaccaacagat
acacagagcttattgagcccttcaaggccctccgaaaccgtggaccttttgttctaaatg
gtgccacaatcaaagcttatgctgatagattcaagagtcagccttcagatagtgtcaagg
ttgtgatccacttaactgatggattagatgcccagtataacatcctgaaagagcgagttg
aactgatgcgttcagctggtgtcagtagtttcattcttgttgccctggagagagtgccac
gatttgaggatgcagttctcttggaatttggccgtggatttaggtacacacgacctctgc
gtgtcaacctcatggacttggattatgaacttctggaagaactggataacattgctgagc
gggaatgctgttctgttccatgcaagtgtaatggccagagaggggacagaggagctgttg
gtgttcctggatcaaagggtcaatctggtggtcaaggcttgagaggacatcctggtgatg
aaggtggtccgggagagagaggtccacctggtgtaaatggaactcaaggattccaaggat
gtccaggtcaaagaggtgttaaaggatctcgaggatacaatggtgaaaagggtgaaattg
gagagattggtttagatggaatcaatggagaggagggaacaagtggcattgctggccctc
caggagatagaggaaaccctggccaaaggggacctaaaggggccaaaggccaggcaggag
atgttggtcagactggaatccgtggtgatcccggcatcccaggaagagacaacaaccaga
ggggaccaaaaggtgatccaggcgatgctggcccaccgggagagccaggagtggacggaa
ataaaggaggacctggtgaaccaggcagacggggccctgatggtagaagggggcctcctg
gtcaagcgggtgctcctggaagggcaggaagtgatggtttaccaggagagacaggaattg
gaggatctcggggtgccgctggaccaattggagcacctggtataagaggagaggatggaa
accctggtccaagggggccaggaggactgccaggaactgctggagaaaagggtagaagag
gtgcccttggccggaagggtgaaccaggggagccaggacctaagggtgtcgttggacccc
tgggaccccgtggggagcctggtgaagatggacgagatggttttggtatacctggtccca
aaggacgaaagggtgatgaaggtttccctggtttccctggtccaaagggtgaagcaggtg
accctggatcaaagggaggacctggacctagaggaaacaatggccagagaggtacctcag
gggaacctggtggacctggacaaaagggagatattggatacccagggccctatggtctaa
aaggatccagaggaactggtccagtgcaatgtgatctggtcaagaaaattagggataact
gtccctgctgctatggtgctcaggaatgtcccctataccctactgagttggcctttgccc
tggatgcatcagatggtgtatcacgctctgctttcaacaacatgcgtgacactgttctcc
gcctggtcagtgacatcactattgctgagagcaactgtccccgaggtgcccgtgttgctc
tagcactttacaacaatgaggtgactactgagctccgctttgcagatacccagaagaagc
gatcacttgttgagcgagttcaaggcctccagactcagcagacccgtaagcagcgcagct
tggagacagccatgaacttcgttgcacagaacacattcaagagagttcgcagtgggttcc
ttgtgcgcaaggttgctgttttctttgtcaacggccctgttacagtcgctcaagaattca
gtgccgctgctttgcgcctctacgatgcaggaatttcctctgtattccttcttaaccgtg
aagatcgccaactcacaagagccttgcagcttaacaacactgctttagcccaaactatcg
tcctaccctcacctggaagtgctgaatacaacaatgtcatcaaaaagatcatgacctgcc
atatctgcctggatttctgtgccccggatgagatgtgtaattatgtcccacatcgtggag
cccgggaccggagggatcccaccactgacttggacatcgacatggtctttgttcttgata
gttcagagagcacctggccctcagtcttcacagagataaagcaatatgtgtctctaatga
tagaacagctagagatgtcccctgagccagccaacactacccatcatgctcgagtagcac
ttgttcagcatgcaccttatgaatacttgcacaatggcagtggcatgcccatcagcgtga
cctttggtttgacagatcacaagtcaccaaacagtgttcgaagctttctactggataagg
tgcaccagcttgaaggaggacgggcccttgcagatgctcttgaaggcactgttgaacatg
tgtttgagaaggtgccacatccccgccatttgaaggtattagttattttggtgactggac
cagttgaactgcatgaggagaggataataagggctgccactgaagttaaatgcaaaggat
acttcatagtggtgatggcagttggaaagctgttcagtacaggcgatgtccgtgtcttgg
cccaagtggcaagcgagccttcagatgtattctttaagagggtggatagaccttcaggct
tctatgatgaccatattcagacatttgccagactgttgcccaagtaccttggccttgaaa
atgctttctacttgtcacctgaagtctctaagaagtgtcagtggtatcaaagtgaccagc
cacacaaattcccattcagtttgccaaaaacagaggagaaacaccaaaagcatcatggac
agcaggaggttcatgacagaaaacataaagaaacaggtatggagaaaatgcatctggtta
acgtcacctccagcggattctccctgcagtggttgagtggcgattcaaaggccacacatg
aggttactgtgactcgcctgaaggatcatagtctggtgctgaggaaaaatgtgaccggca
gccatctctccatttctgagttggaggcagccgaaacctatcatgtagtggtcaatactc
acagtgtcaatggtcatgttgccagcacctacaaaggcattgttcccacaaaatcagcac
atatgaaggtccttactgtaagtgacgtgatggggattgtgcccactgcacccttgagta
aaccagaaacaaaatcagcagaacaaaaaatacttaatgccagtaaaatgatggtgatga
tgtctactgcacccttgagtaaaccagaaattaaatcagcagaacagaaggttcttactc
caagagaggtgatggggattgcaccctctgcacccttaagtaaaccagaaattaaatcag
aagaacagaaggttcttattccaagtgaagtgataggaattgcaccctctgcaccgtcaa
gtaaagcagacattaaaacagcagaacagaaggctccgagtgaagcaatggggattgtgt
cctctgcacccttaagtaaaccagaaataattaacaatcctatggacccatgttcacttg
actttgacactggactgccatgcaaagattaccaagctaagtggtactttgacagaaaga
atggattctgtacacagttctggtatggaggttgtggaggaaatgacaataggtttgaga
ctgaggctgattgcctcaaacgctgcatgaagccagtggctgaacctaaagcaagtgaag
agcatgtcaaagctgttctccccccagcaccagctccagctgccctgcgctccagtgtgt
atatctgcaagctaccaaaagaagagggatcctgtgctaaatttgtgcttaaatggcatt
atgacccgcttagtggaaactgtacccgcttctggtacggaggatgcggagggaaccaga
atcgctttgatacacaagatgagtgtgagaaggcttgtggaaaagcagcacctgttaaac
gagggatcatcgctgcagttaacacatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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