KEGG   Sinocyclocheilus rhinocerous: 107728322
Entry
107728322         CDS       T04916                                 
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx00900  Terpenoid backbone biosynthesis
srx01100  Metabolic pathways
Module
srx_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:srx00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    107728322
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:srx01006]
    107728322
Enzymes [BR:srx01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     107728322
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     107728322
    2.5.1.29  geranylgeranyl diphosphate synthase
     107728322
Prenyltransferases [BR:srx01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   107728322
SSDB
Motif
Pfam: polyprenyl_synt GCSF
Other DBs
NCBI-GeneID: 107728322
NCBI-ProteinID: XP_016393934
Position
Unknown
AA seq 370 aa
MPLQHECAERLDIRENTELSPSVESCVFTLALVFSLSRFLCRNGGMDGDERATSERILLE
PYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDDIEDSSKLRR
GFPVAHSIYGVPSVINSANYVYFLGLEKVLTLEHPEAVHVFTRQLLELHRGQGLDIHWRD
TYTCPSEAEYRGMVLQKTGGLFGLAVGLMQLFSHWKPDLKPLLDTLGLFFQIRDDYANLN
SKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENVDIKRYCVDYLEKV
GSFAYTRHTLLDLEAEAYRLIAELGGNPELEALVKHLSRMYKEPGGGASASQSKELRGGA
SANQNNDSAL
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgccgctgcagcacgagtgcgccgagcgtttagatataagagaaaatactgagctgtca
ccttctgtggagtcttgtgtttttactctcgctctcgttttctctctcagcaggtttctt
tgtagaaacggagggatggacggagacgaaagagcaacttctgaaaggattcttctggaa
ccgtacaagtacttgttacagctgccaggaaaacaagtccgaacaaaactctcgcaagcg
ttcaaccactggctcaacgtcccagaggacaaacttcaggtgattatcgaggtgactgag
atgctgcacaacgccagtctgctgatcgacgacattgaagacagctccaagctgcggcgc
ggtttcccggtggcccacagcatctacggcgtgccgtcggtcatcaactccgccaactac
gtctacttcctaggcctggagaaggtgctgacgctagagcaccccgaggccgtgcacgtc
ttcacccgtcagctgctggagctgcaccgcggccagggtctggacatccactggagggac
acctacacctgccccagcgaggcggagtaccgcggcatggtgctgcagaaaaccggtggc
ctcttcggcctcgccgtgggcctcatgcagctcttctcccactggaaaccagatctgaag
ccgcttttggacaccctggggctcttcttccagatccgggacgactacgccaacctgaac
tcaaaagagtacagcgaaaacaagagcttctgcgaggacctgacggagggcaagttctcc
ttccccaccattcacgccatctggtcgcgtcctgagagcacgcaggtgcagaacatcctc
cggcagcgcacggagaacgtggatatcaaacgctactgtgtggactatctggagaaggtg
ggctcgttcgcttacacccgtcacacgctgctggatctggaagccgaggcctatcgcttg
atcgctgagctcggagggaatcccgaactggaggctctggtgaagcatctgagtcgcatg
tataaagagcccgggggcggagcttcggccagccaatcgaaagagctcagaggcggagct
tcggccaatcaaaacaatgactctgcactgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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