KEGG   Sinocyclocheilus rhinocerous: 107730342
Entry
107730342         CDS       T04916                                 
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107730342 (taf6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:srx03021]
    107730342 (taf6)
   03036 Chromosome and associated proteins [BR:srx03036]
    107730342 (taf6)
Transcription machinery [BR:srx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107730342 (taf6)
   Coactivators
    SAGA/TFTC/STAGA complex
     107730342 (taf6)
Chromosome and associated proteins [BR:srx03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     107730342 (taf6)
    STAGA complex
     107730342 (taf6)
    TFTC complex
     107730342 (taf6)
    SAGA complex
     107730342 (taf6)
    SLIK complex
     107730342 (taf6)
SSDB
Motif
Pfam: TAF6_C TAF Histone TFIID-31kDa CENP-S Bromo_TP
Other DBs
NCBI-GeneID: 107730342
NCBI-ProteinID: XP_016396640
UniProt: A0A673KHQ5
Position
Unknown
AA seq 636 aa
MAEERRQKLCSVILPTESMKAMAESVGVGSLQEESCLALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTGDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIDGVQPAIPENPPPVPKEQQKTDSTEPLKAVKPGQEEEGSIQT
KGQGANSAEVKGKEKMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDP
GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVT
CIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSLLDDKTQW
TTRYGCIAGLAELGHDVIKTLIIPRLSVEGARIKAVMDGPVVSNIDKIGADHVQSLLLKH
CACVVAKTRPLPDMVDQYKADYGYLGTMLCSHVVKARAQAAFQAQTVNRTTLTITQPRPT
LSMSQSGLSASSGSRTPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSAGAASTQQ
VITLSSSQSGSSVTSTVPSTPTSLQPLVKLESGTTGAVSGPRPLQKYIVVSLPSSSSSLE
NKGSGVIPSSTSPISMESAVKLERSESPAANTQSPH
NT seq 1911 nt   +upstreamnt  +downstreamnt
atggcagaggagcgcagacagaagctgtgttcggtgatcttgcccactgaatccatgaag
gcgatggcggagtcagtgggtgtgggctcactacaggaagagagttgtctggccctcagt
gaagaggttagctacaggatcaaggagattgcacaggatgcactgaagtttatgcaccac
ggtaaaagacgcaaacttactactggtgacattgaccacgctcttaaactaaaaaacgtg
gagcctctgtatggattccagtctcaagagttcatcccatttcgctttgcaagtggaggc
ggcagagaattgcacttctatgaagaaaaggaagtggatcttagtgatatcatcaacacg
cccctccctagagtccctcttgatgtttcgctcaaagctcactggctaagtattgatggt
gtccagcctgcaataccagaaaacccacctccagttcctaaagagcagcagaagacagat
tccacagagccactcaaagctgtcaaacctggacaggaagaggaaggctctatccagacc
aagggtcagggtgcaaactctgcagaagtcaaaggaaaagagaagatgcggatgaagcca
cgtagcacacatgagctttctgtggagcagcagctgtactataaagaaatcaccgaagca
tgtgtgggatcatgtgaagccaaaagagcggaagcactgcagagcatagccacagaccca
gggctgtaccagatgctgccaaggttcagtaccttcatctctgagggcgtccgtgtaaat
gttgttcagaataacctggctctgctgatatacttgatgaggatggtgaaggctttaatg
gacaatccaactctatatttggagaaatatctccatgagttgatcccagcggtggtgacg
tgtattgtcagtaagcagctgtgtctgaggcctgacgtggacaatcactgggctctgcga
gactttgctgcccggctgatggctcagagctgcaagacgttcagcacaacaaccaacaac
atccagtcacgtatcaccaagacgtttactaagtcattgttggatgataagactcagtgg
acaactcgttatggctgcattgctggacttgctgaacttgggcatgacgtgataaagaca
ttgatcatccctcggctgtctgtagagggtgctcgtattaaagctgtgatggatgggcca
gtggtgtccaacattgataagatcggagctgatcacgtgcagagtctgttactgaaacac
tgtgcatgtgtagttgctaaaactagaccgctcccagatatggtggatcaatacaaggca
gattatggatatctgggcaccatgctctgttcacatgtggtgaaggcccgtgcacaggct
gccttccaggcccaaactgttaacagaaccacactcactatcacacagccacgcccaact
ctgtcaatgtctcagagtggattgtcagcatcaagtgggtcacgcacaccgagcattatt
aaagtacccagttcactcacccttatgtccactcgccctggaacacccacccagccgtca
cccccagcaaccaaatatattgttatggcaacaagtgcaggagctgcatccacacagcag
gtaatcactctcagctcctcccagtctggatcttctgtcacaagtacagtccccagcacc
cccacatctttacaaccactcgtcaaactggagtctggaaccacaggtgctgtgagtggc
ccgcgccctcttcagaaatacattgtggtgtctttgccttcatcctcttcctcactggag
aacaagggctcaggtgtcatcccatcctctacctcacctatcagtatggagtcggctgtc
aagttggaacgttcagaatcaccggctgcaaacacacagtcgccacattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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