KEGG   Sinocyclocheilus rhinocerous: 107743644
Entry
107743644         CDS       T04916                                 
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03440  Homologous recombination
srx03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107743644
   03460 Fanconi anemia pathway
    107743644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srx03400]
    107743644
Enzymes [BR:srx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     107743644
DNA repair and recombination proteins [BR:srx03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     107743644
   FA (Fanconi anemia) pathway
    Downstream FA components
     107743644
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD ResIII
Other DBs
NCBI-GeneID: 107743644
NCBI-ProteinID: XP_016412471
Position
Unknown
AA seq 1233 aa
MAAAPVEYTIGGVKINFPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSA
LAWQQAQFGKEQDACSSSADCKKPAVATPCQCVCHNRNAHPTSSSTVSKPPLVDLPCEGT
SAQAPTPLSKEAVNSDQSKKSTLSSRLSEKLQASLSNGEQDDDFKIDRKRIRTPSTEQKS
SKRRCLKRGVIYIDDDDEEAEHLERLVPGAQSWTMELNSGARADNCQSQPQCCSPVSCSL
CPCSNLKAGQKTVEKSKDSDKDKEGSGRKKIPKIFFGTRTHKQITQIARELKRTLYSTVP
MTILSSRDHTCVHPEVVPHANRNERCKELLEAKNGLSCRYYHNVHKMRDQSTLQWVHGLH
QAWDIEDLVRLGGKLRSCAYYAARELMQDACIVFCPYNYLLDPLIRESMEINLKEQIVVL
DEAHNIEDCARESASYTLNQAQLLLARDELDGMVTHNIRRDQHRPLLAFCCSLANWVKES
CNSLEEREYESSCKVWTGAEILGIFHGLGITADTFSLLQKNLAAVLEKEERIGLVNGRED
VVQVPTISSNTQSMLKSLFMVLEFLFRQNCRFADDYRVALQQSYMWTTQQDLPDAQGFFA
RPQRRRQSTRTKTLVHTLSFWCLNPAVAFSDLSGSVRSIVLTSGTLSPMGSFSSELGIKF
SIQLEANHVISKSQVWVGTVGAGPQGRKLCATFQHAETFAFQDEVGALLLKVCLTVSQGV
LCFLPSYKMLDKLRDRWMNTGLWDKLEERKTVITEPRGGGKGDFDELLQTYYEAIRGTAA
NSENRDGALLVAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDKHAKS
RGLLPGGRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRTNPNKYITGLSKWVRQL
VRHHDTFTGAMQSLESFSQGQRGAVETFEETQSQAAPQHPSPSTITSPPPEIITPLKPFD
HRLAPPNLHTEVRAANSESRSSESGDKKNMQHPSEPSREHNVQRTPWPTSHLFTSTPVSS
QFKTPIFQSEPDSSSVINKQVQHEVISVAPKHQINVVPDLNDSSVEPQLEQVFVIPASTS
KDTTSGMDHEDTEVDEQSIFHSPELFEGDEEEKEETTEVEKSPPEVSHPLANSTASVLLE
DLFGSEEGKRTLSEDLVSSAVPDNTLLQGSTEQRGLNCGTDIGSQNGASSSRLRRLSRCR
QKRPNTSAASGKLTNYFKRVPPTSQPCIIIIDD
NT seq 3702 nt   +upstreamnt  +downstreamnt
atggctgcggctccagtggagtacaccataggtggggtgaaaataaacttcccctgcaaa
gcttatccctctcagctggccatgatgaactcaatcattcgtggacttaacaatgggcag
cactgtctgttggagagccctactggcagtgggaagagtcttgctttgctttgttcagcg
ctcgcatggcagcaagcacagtttggtaaagaacaggatgcatgttctagttcagctgac
tgtaagaaaccagcagtggctactccatgtcagtgtgtgtgccataaccgaaatgcacac
cccacttccagcagcacagtatctaaaccacctctggttgatcttccttgtgaaggtact
tctgctcaagctccaacccctctctcaaaagaagcagtcaatagtgaccagtctaagaag
tccactttgtcttcccgtctctctgagaaacttcaggcctctctctccaatggagaacaa
gatgatgattttaagattgacaggaagcgcattcgtacgccaagcacagagcagaagagc
agcaagcgaagatgtctcaagcgaggagtgatttacattgatgatgatgatgaagaggcg
gagcatctggagagactggtgcccggggctcagagttggaccatggaattgaacagtggt
gccagagctgacaactgccaatcgcagccacagtgttgttctcccgtgtcttgttcactc
tgtccttgctccaacctcaaagcaggacagaaaacggttgaaaagtccaaggacagtgat
aaagacaaagagggaagcggaaggaaaaagatcccaaagatcttctttggcactcgtact
cataagcagatcacacagatcgcacgggagctcaaacggacactttactccaccgtgccc
atgacgatactgtccagccgagaccatacctgtgttcatcccgaagtggtgcctcatgcc
aaccgcaacgagcgctgcaaagagctgctggaggccaagaacggtctgtcatgtcggtac
taccacaatgtgcataaaatgcgtgatcagagcactttacagtgggttcatgggctacat
caagcctgggacattgaggatctggtccgtcttggcggtaagctgcggtcctgtgcttac
tacgcagctcgggagctcatgcaagatgcttgcatcgtgttctgtccttacaactacctg
ctggaccccctcattcgtgaaagtatggaaatcaatctgaaggagcagattgtggtgctg
gatgaggctcataacattgaggactgtgcccgtgagagtgccagttacactctgaaccaa
gctcagctgttgctggcgcgtgatgagttggatggaatggtgacacacaacattcggcgc
gatcaacacaggcctctgctagccttctgctgcagccttgccaattgggtgaaggaaagc
tgcaatagcttggaggagcgtgaatatgagtcttcctgtaaggtctggacaggagccgag
attcttggcatcttccatggccttggcatcacagcagacaccttctctttgctacagaaa
aacctggcagcggtgctggagaaggaggagcggattgggctagtgaacgggagagaagac
gtggtgcaggttcccaccatcagctccaacactcagtcaatgctcaaaagcctctttatg
gtgctggaatttcttttcagacaaaattgcaggtttgcagatgattaccgtgtggccctc
cagcagagctacatgtggaccacccagcaggacctgcctgacgctcagggctttttcgca
cgaccccagcgtcgccgacagagcacccgcaccaaaactctggtgcacaccctgagcttt
tggtgcctcaaccctgctgtggcattttcagatctgagcggctcagtacggagtatcgtg
ctgacctcgggcaccctctctcccatgggctccttttcctctgaactgggcatcaaattc
tccatccagttggaggcaaatcatgtcatcagcaagtcacaggtctgggtcggtacagtt
ggtgcagggcctcagggtcgtaaactttgcgccacatttcagcatgcagagacatttgcc
ttccaggatgaagtaggggccctgctgttgaaagtctgcctcacagtgagccaaggggtt
ctctgcttcctgccatcctacaagatgttagataaactgagggaccgctggatgaacaca
ggtctgtgggacaagcttgaggagcggaagactgtaattactgagccacgtggtggtggc
aagggtgattttgatgagttgctgcagacatactacgaggccatcagaggaacagcagcc
aacagtgaaaacagagatggagcactgctggttgcggtttgcagagggaaggttagcgag
ggcttagacttcactgatgataatgccagagcagtggtcactattggtatcccattcccc
aatatcaaagacttgcaggttgaactgaagatgaaatacaatgacaagcatgccaagtca
cgagggcttctgcctggtgggcgctggtacgagattcaagcatatcgggcactaaaccag
gcactcggaaggtgtatacgacatcgaaatgactggggggcacttatactggttgatgac
cggtttaggacgaacccgaacaaatacatcacaggcctgtcaaagtgggtgcgtcagcta
gtgaggcaccatgacaccttcactggcgccatgcagtccctggagtccttttctcaaggc
cagcggggggcagtagagacctttgaagagacacaatctcaagctgcccctcaacacccc
agcccttccactattacctcaccccctcctgagataatcacccccctcaagccatttgac
cataggcttgcaccgccgaacctacacaccgaggtgcgggcagccaactctgagagcagg
tcttctgaatcaggtgataaaaagaatatgcagcatccatctgaaccaagcagagaacat
aatgtccaaagaacaccatggcctacaagccacctcttcacttccactccagtcagtagc
caattcaagactcctatttttcaatccgagccagattcgagttcagtgatcaacaagcaa
gttcagcatgaagttatttctgtggcaccaaagcaccaaataaatgtggttcctgaccta
aatgacagttcagttgaacctcaacttgagcaggtctttgttatccctgcctctacttca
aaggataccaccagcggaatggaccatgaagatactgaagtggatgaacaaagtatcttc
cacagccctgagctttttgaaggagatgaggaggagaaggaagagactactgaggtggag
aaatctcctccagaagtcagccatcctctcgctaatagcacagccagtgttcttttagag
gacctctttggttcagaggaaggaaagaggacattgtctgaagaccttgtgagcagcgct
gtcccagacaacacattgttacagggtagtacagagcagagaggtttaaactgcgggaca
gatattggctcacaaaatggtgccagcagtagtcggttacgtagactctccagatgtagg
cagaaaaggcccaacacatcagcagcatcaggtaaactcaccaactattttaaacgcgtg
cccccaactagccaaccgtgcataattataattgatgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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