KEGG   Serratia rubidaea: AXX16_1288
Entry
AXX16_1288        CDS       T04417                                 
Name
(GenBank) Ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
srz  Serratia rubidaea
Pathway
srz00330  Arginine and proline metabolism
srz00480  Glutathione metabolism
srz01100  Metabolic pathways
srz01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:srz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    AXX16_1288
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    AXX16_1288
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    AXX16_1288
Enzymes [BR:srz01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     AXX16_1288
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase
Other DBs
NCBI-ProteinID: AML57008
Position
1392255..1394417
AA seq 720 aa
MKELKIATSASLVASIETLRQVVRVEHTDYTDVAAVVVSVDDVSDGVLARLQATGFNIPA
FVAVEGEEQLSPDYLPLVTGVFTLSGASKAFYMAQLEAAADAYEQALLPPFFKTLKTYVE
MENATFACPGHQGGEFFRKHPAGRQFYDFYGETLFRSDMCNADVKLGDLLIHEGSAKDAQ
KHAARVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDARCFNEEYLRQQIREVAPDKAEAARPFRLAIIQLGTYDGTIYNA
RQVIDTIGHLCDYILFDSAWVGYEGFIPMLKECSPLLLELDEHDPGIFVTQSVHKQQAGF
SQTSQIHKKDDHIKGQKRHCNHKHLNNAFMLHASTSPFYPLFAALDVNAKMHAGEAGRRM
WMDCVLLGIETRKQLLQRCSQLRPFIPPQVDGQPWQSFDSEHIAGDARFFTFEPDAAWHG
FAGYAQEQYLVDPCKLLLTTPGIDAQTGQYSEFGVPAVILADFLRENGIVPEKCDLNSIL
FLLTPAENPAKMALLVDKLVQFERYIEQDAPLSEVLPTVYRKHERRYRDYSIRQLCQEMH
DLYVSHDVKQLQKEMFRQAHFPPVMMNPQDANVEFVRDNVELVPIAQAAGRIAAEGALPY
PPGVLCVVPGEVWGGAVQRYFLALEEGINRLPGFSPELQGVYVEKKDHGWKRIFGYVVKP
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgaaagaattgaaaatcgcaaccagcgccagtttggtcgccagcattgaaaccctgcgc
caggttgtgcgcgtcgaacacaccgactataccgacgtggcggcggtggtggtttccgtc
gatgacgtgagcgacggcgttctggcgcgcctgcaggcgaccgggtttaacattccggcc
tttgtcgcggtagagggcgaagagcagctttcaccggattacctgccgctggtgaccggc
gttttcaccctgagcggcgccagtaaggcgttttatatggcgcagctggaagccgcggcg
gatgcctatgagcaggcgctgctgccgccgtttttcaaaacgctgaaaacctatgtggaa
atggaaaacgccacctttgcctgcccggggcatcaggggggcgagttcttccgcaaacat
ccggccggccgccagttctatgatttctatggcgaaaccctgttccgttccgatatgtgc
aacgccgacgtgaagctgggcgatttgctgatccatgaaggctcggcgaaggatgcgcaa
aaacacgctgcgcgggtgttcaacgctgataaaacctactttgtgcttaacggcacctcc
gcagctaacaaggtggtgaccaacgcgctgctgacgcgcggcgatctggtgctgttcgat
cgcaataaccataagtccaaccatcacggcgcgctgattcaggcgggcgccacgccggtc
tatctggagaccgcgcgcaatccgtttggttttatcggcggcatcgacgcccgctgcttt
aacgaggagtatttacgccagcaaatccgcgaggtggcgccggacaaagccgaggcggcg
cggccgttccggttggcgattattcagctcggtacttacgacggcacaatctacaacgcc
cggcaggtgatcgacaccatcggccacctgtgtgattacattctgtttgattccgcctgg
gtgggctatgaaggctttatcccgatgctgaaggagtgttcgccgctgctgctggagctg
gatgagcacgatccgggcatcttcgtcacccagtcggtgcacaagcagcaggcgggtttt
tcacagacgtcgcaaatccacaagaaagacgaccatatcaaggggcagaagcgccactgt
aaccataagcacctgaataacgcctttatgctgcatgcgtcgaccagcccgttttacccg
ctgttcgccgcgctggacgtcaacgccaaaatgcacgccggcgaggcggggcggcgcatg
tggatggactgcgtactgctggggattgaaacgcgcaaacagctgctgcagcgctgcagc
cagctgcggccgtttattccgccgcaggtggacgggcagccgtggcagagcttcgacagc
gagcatatcgccggcgacgcacgcttcttcacctttgaaccggacgcggcctggcacggc
tttgccggctacgcgcaggagcagtatctggtcgacccgtgcaagctgctgctgaccacg
ccgggcattgacgcccagaccgggcagtacagcgagtttggcgtgccggcggtgattctg
gccgacttcctgcgggaaaacggcatcgtgccggaaaaatgtgaccttaactcaatcctg
ttcctgctgaccccggcggaaaacccggccaaaatggcgctgctggtggacaagctggtg
cagttcgagcgctacattgagcaggatgcgccgctcagcgaggtgctgccgacggtctac
cgcaagcatgaacgccgctaccgcgactacagcattcgtcagctgtgccaggaaatgcac
gacctgtatgtcagccatgatgtgaaacagctgcaaaaagagatgttccgtcaggcgcac
ttcccgccggtgatgatgaacccgcaggacgccaacgtggagtttgtccgcgataacgtt
gaactggtgccgattgcccaggcggcggggcgtattgccgccgaaggggcgctgccttat
ccgccgggcgtgctgtgcgtagtgccgggagaagtgtggggcggtgcggtacagcgctat
ttcctggcgctggaagaggggattaaccgcctgccgggcttttcgccggagctgcagggc
gtgtatgtcgagaagaaagaccacggctggaagcggatcttcggttacgtggtcaagccg
tag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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