KEGG   Streptococcus sanguinis: SSA_0132
Entry
SSA_0132          CDS       T00473                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha chain, putative
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
ssa  Streptococcus sanguinis
Pathway
ssa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ssa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SSA_0132 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssa03021]
    SSA_0132 (rpoA)
   03400 DNA repair and recombination proteins [BR:ssa03400]
    SSA_0132 (rpoA)
Enzymes [BR:ssa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SSA_0132 (rpoA)
Transcription machinery [BR:ssa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SSA_0132 (rpoA)
DNA repair and recombination proteins [BR:ssa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SSA_0132 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Mg_chelatase_C
Other DBs
NCBI-ProteinID: ABN43595
UniProt: A3CK90
Position
121286..122224
AA seq 312 aa
MIEFEKPNITKIDENKDYGKFVVEPLERGYGTTLGNSLRRVLLASLPGAAVTSINIEGVL
HEFDTISGVREDVMQIILNVKGIAVKSYVQDEKIIELDVEGPAEVTAGDILTDSDIEIIN
PDHYLFTIGEGASFKATMTVNSGRGYVPADENKKDDAPVGTLAVDSIYTPVTKVNYQVEP
ARVGSNDGFDKLTLEILTNGTIIPEDALGLSARILTEHLNLFTNLTEVAIAADVMKEAEK
TSDDRILERTIEELDLSVRSYNCLKRAGINTVFDLTEKSEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgagtttgaaaaaccaaatataacaaaaattgatgaaaataaagattatggcaag
tttgtagtagagccgcttgagcgtggttatggtacaacactgggaaattctcttcgccgt
gtgcttttggcttcacttccaggtgctgctgttacttcaattaatattgaaggtgttttg
cacgagtttgatacaatttccggtgtccgcgaagacgtgatgcaaattattctgaacgtc
aaagggattgctgtaaaatcttacgtccaagacgaaaagattattgaactggatgttgaa
ggaccagcagaagtaactgccggagacattttgacagacagtgatattgaaattataaac
cctgatcattatctctttacaatcggagaaggcgcaagctttaaggcaacgatgactgtt
aacagcggccgtggttatgtgcctgctgatgaaaataagaaagatgatgcaccagtggga
acacttgcggtggattctatctatacgccagtgacaaaagttaattaccaagttgagcca
gctcgtgttggtagcaacgatggttttgacaaactaacccttgaaattttaacgaacgga
acaattattccagaagatgctttgggactttcagcccgcatccttacggaacatttgaat
ctcttcactaatctgacagaagtagctatcgctgcagacgttatgaaggaagcagaaaag
acttctgatgaccgcattttggaacggaccatcgaagaattagatttgtcagttcgctca
tacaactgtttgaaacgtgcaggtatcaatactgtatttgatttgacagaaaaatctgag
cctgaaatgatgaaagttcgtaacttaggacgtaagagtctggaagaagtaaaagttaaa
cttgctgatctcggtctggggttaaaaaacgataaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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