KEGG   Swingsia samuiensis: E3D00_00090Help
Entry
E3D00_00090       CDS       T06080                                 

Definition
(GenBank) methionine--tRNA ligase
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
ssam  Swingsia samuiensis
Pathway
ssam00450  Selenocompound metabolism
ssam00970  Aminoacyl-tRNA biosynthesis
ssam01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ssam00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    E3D00_00090
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    E3D00_00090
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ssam01007]
    E3D00_00090
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ssam03016]
    E3D00_00090
Enzymes [BR:ssam01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     E3D00_00090
Amino acid related enzymes [BR:ssam01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   E3D00_00090
Transfer RNA biogenesis [BR:ssam03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    E3D00_00090
 Prokaryotic type
   Other AARSs
    E3D00_00090
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: tRNA-synt_1g tRNA-synt_1 tRNA-synt_1e Anticodon_1 tRNA-synt_1c tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID: QDH16147
UniProt: A0A4Y6UI97
Position
complement(23410..24945)
Genome map
AA seq 511 aa AA seqDB search
MTRRFTITTPIFYVNGAPHIGHAYTSIAADVLARFHRLNGDDVLFVSGTDEHGQKVEQTA
KQKGLATQLYADEISDSFRQMQRDMAISTDEFIRTTEERHKATASALWEKVAENGYIYLG
AYEGWYSTRDEAFIGEDELVKKPDGTFVAPSGAPVEKVKEPSYFFKLSAFQDKLLKLYEE
NPDFIRPNGPRREIESFVKQGLKDLSISRTSFKWGIPVPHDPDHVMYVWFDALANYLTAV
GYPNMNDPRAPFWPADLHIVGKEIARFHCVYWPAFLMAAGLELPKSIFAHGWWTVEGEKM
SKSLGNVLDPKALADEFGLDALRFFLMREVPFGGDSNFSRRSMITRTNVELANDLGNLCQ
RTLSLVARNLDGVLPEHGPFTEDDQAILAVSQVLPTIMAEQIERKAITEALEEVWKLIRA
ANSYIDRQAPWALKKTDPERMAHVLRVLVDIIRTISTMLQPFMPDTMDKMLTQLSVDKSE
RTFKDLDTPLPAGRVLPKPVGLFPRFVEDAA
NT seq 1536 nt NT seq  +upstreamnt  +downstreamnt
atgacgcggcgtttcaccatcaccactccaattttttatgtaaatggtgctcctcatatt
gggcatgcttatacgtcgatcgcagcagatgtgcttgcgcggtttcatcgtttgaatggt
gatgatgttttgttcgtgagtggaacggacgaacatggtcagaaagttgaacaaacagct
aagcaaaaaggtttagcgacacagctttatgccgatgaaatttcagattcatttcgccag
atgcagcgcgatatggcgatttcaacggatgaatttatccggacaacagaagaacgccat
aaagcaacggcatctgctttatgggaaaaagtagctgaaaatggctatatttatcttggt
gcttatgaggggtggtactccacgcgtgatgaagcgtttattggggaagatgaactagtc
aaaaaaccagatggtacgtttgttgctccgtctggtgcgccggtagagaaggttaaagag
ccgtcttatttctttaaactctcggcttttcaggataaacttcttaaattgtatgaagaa
aaccctgattttattagacccaatggtcctcgcagggaaattgaaagctttgttaagcaa
gggctaaaggatttatcaattagccggacgagctttaagtgggggattcctgtccctcat
gatccagatcatgtcatgtatgtttggtttgatgcgttggccaattacctaacagcggtt
gggtaccctaatatgaatgatccacgggcaccattttggccagcggatttgcatattgtt
ggcaaagagattgcgcgttttcactgtgtctattggccagcgtttttgatggctgctggt
ttagagctgcctaaaagtatttttgctcatggctggtggaccgttgaaggcgaaaaaatg
agtaagtctttagggaatgttctggaccctaaagctttggcggatgagtttggtcttgat
gcattgcgttttttcttaatgcgtgaagttccattcggaggggattcaaactttagtcgt
cgttccatgattacacggactaatgttgaactggcgaatgatttaggaaatttgtgccaa
cggacgttaagtttggtcgctcggaatttggatggtgttcttccagagcacgggccattt
accgaagacgatcaggcgatattggcggtctctcaggtcttgccaaccattatggcagaa
cagattgaaagaaaagcaataacagaggctctcgaagaagtctggaaacttatccgtgca
gcaaattcttacattgatcggcaagcaccatgggctttgaagaagactgatccagaaaga
atggctcatgttctgcgtgtattggttgatataattcgtacgatttcaacaatgttgcag
ccttttatgccggacacgatggataaaatgctaactcaactcagtgttgataagagtgaa
cgtacttttaaagatttagatacgccactgcctgctggccgtgtattgccaaaacctgta
ggattattccctcgcttcgtggaggatgctgcatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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