KEGG   Swingsia samuiensis: E3D00_02355
Entry
E3D00_02355       CDS       T06080                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ssam  Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:ssam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ssam03016]
    E3D00_02355 (truB)
Enzymes [BR:ssam01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     E3D00_02355 (truB)
Transfer RNA biogenesis [BR:ssam03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    E3D00_02355 (truB)
 Prokaryotic type
    E3D00_02355 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: QDH16545
UniProt: A0A4Y6UKK1
Position
complement(492387..493358)
AA seq 323 aa
MAKKYGREVDGWLILDKPLGPTSTDMVNKMRWAFNAKKAGHGGTLDPLASGVLPIAFGKA
TRTIPYIMDATKKYRFTLSLGESRTTDDREGEVLFTSDHRPSDEEIRAVLPALTGDVMQV
PPVFSALRVGGQRAYDLARAGKPPELPPRPARIDSIVLVDRPDRDTAVFEVQSGKGVYMR
SIARDIALACGTVGHISVLRRTKCGPFDLSHAKRIDEIRLDKSSETVDNADTLPVSLLEV
GTALVDIPALAVTDEEGRILVWGQSLDPDSLTYPLPVSSHFGSNVWRAMLGEHVLGLCSV
QNGRLRAVRMLENHEFFGGQDVD
NT seq 972 nt   +upstreamnt  +downstreamnt
atggctaagaaatatggacgggaagttgacggctggttaattctcgataagccacttggc
cccacctcgaccgatatggttaataaaatgaggtgggcgtttaatgctaaaaaagcaggg
catggtgggacgctagatcctcttgcgtcaggtgttttgccgatagcttttggtaaagct
acccgtacgattccttatattatggatgccacaaaaaaatatcgtttcacgttgagttta
ggtgaaagccgtacgacagatgatcgtgaaggggaggttttgtttacttcggatcatcgc
ccgtcggatgaggaaattagagctgttttgcctgcgcttacgggagatgtgatgcaagtt
cctcccgtgttttctgcattaagggtgggaggtcagcgtgcttatgacttggctcgcgct
gggaagccaccagaattaccgccaagaccagctcggatcgattcgattgtgttagttgat
cgtcctgatcgggatacggccgtatttgaagttcagtctggcaaaggtgtttatatgcgc
tctattgcgcgagatatcgccttggcatgtgggacggttgggcatatttcggtcttgcgt
cgaacgaaatgtggtccgtttgatttgtctcatgcaaagagaattgatgagataagactg
gacaaatcgtctgaaactgtggacaacgccgatactcttccggtttctcttctggaagta
gggaccgcgctggtcgacatcccggcgttggccgttactgatgaagagggaaggatattg
gtttgggggcaatctcttgatcctgacagcctgacatatcctttgccggtatcgtcacat
tttggaagcaatgtgtggcgtgcgatgctcggagagcacgtattgggattgtgtagtgtt
caaaacggacgcttgcgagccgtacgtatgttagaaaaccatgagttttttggaggacaa
gatgtcgattag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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