KEGG   Swingsia samuiensis: E3D00_04805
Entry
E3D00_04805       CDS       T06080                                 
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
ssam  Swingsia samuiensis
Pathway
ssam00540  Lipopolysaccharide biosynthesis
ssam01100  Metabolic pathways
ssam01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:ssam00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    E3D00_04805 (rfaD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:ssam01005]
    E3D00_04805 (rfaD)
Enzymes [BR:ssam01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     E3D00_04805 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:ssam01005]
 Core region
  E3D00_04805 (rfaD)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd RmlD_sub_bind 3Beta_HSD NAD_binding_4 NAD_binding_8
Other DBs
NCBI-ProteinID: QDH16961
UniProt: A0A4Y6UKP3
Position
1042379..1043359
AA seq 326 aa
MIIVTGGAGFIGSCLHAALRRRGLRTVIVDRLREGVKWRNLLSHAPDRIVSPEELPEFLE
DAPEIQAVFHMGAISSTTARDGDLVWHSNVTLSQFLWRWCARHHVPMIYASSAATYGAAD
KPEMFLDGVDNISHLKPLNLYGWSKQSFDVWVKRELQSGNAAPPQWAGLKFFNVYGPNEY
HKGSMISVVKVKYDDLQKGFAPKLFRSDVPSIPDGQQMRDFIWVGDVVDVMMWLFDHPKV
SGLFNCGTGVARSYLDLAYAVCDAAQRERAVEFVDMPEKLKGQYQSYTCANMQRLRDAGY
ENSFTSLEDGIHQYVREYLMKPEPNL
NT seq 981 nt   +upstreamnt  +downstreamnt
atgattatcgtcaccggtggagccggatttattggatcgtgtcttcatgccgccttgcgt
cgccgcggtttgagaactgttattgtggatcgtttgcgggagggggtaaaatggcgcaat
cttttatctcacgcccctgatcggattgtatctccagaagaattgcctgagtttcttgag
gacgctccagagattcaggctgtattccatatgggtgcaatcagttcaacgacggcccga
gatggggaccttgtttggcattcgaatgtcacactttcccaatttctgtggcgttggtgt
gcacgacaccatgttccgatgatctatgcctcatcggcggctacctatggggcagcggat
aaacctgagatgtttttagacggtgtcgacaacatttctcatcttaaacctttaaattta
tatggctggtcaaagcaatcatttgatgtgtgggttaagcgtgaactgcagtcaggcaat
gcagcacctccccagtgggctggactgaagttttttaatgtttatggcccgaatgagtat
cataaaggctcaatgatatcggttgtgaaggttaagtatgatgaccttcaaaaaggcttt
gcaccaaagttattccgatccgatgtgccgagtattccagacggtcagcaaatgcgggac
tttatctgggtcggagatgtcgttgatgtgatgatgtggctctttgaccatcctaaagtc
agtgggctgtttaactgtgggacaggtgtcgcccggagctacttggatttggcatatgcc
gtgtgtgatgcggcacagcgtgaacgagctgttgagtttgttgatatgcctgagaagtta
aaggggcaatatcagtcatatacatgcgcaaatatgcaacggttgagagacgccgggtat
gaaaattcatttacctctctcgaagatggtattcatcaatatgtacgggaatatttaatg
aaaccggagcctaatctttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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