KEGG   Swingsia samuiensis: E3D00_05375
Entry
E3D00_05375       CDS       T06080                                 
Name
(GenBank) rRNA pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
ssam  Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:ssam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssam03009]
    E3D00_05375
Enzymes [BR:ssam01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     E3D00_05375
Ribosome biogenesis [BR:ssam03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    E3D00_05375
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF6494 RHS_repeat
Other DBs
NCBI-ProteinID: QDH17057
UniProt: A0A4Y6UL10
Position
complement(1168540..1169316)
AA seq 258 aa
MTTHSTSNSDEPKGERIAKFLARAGVASRRDIERMIEEGRIKLGGHPVTHPATFVQSGDM
IQVDGKLIENPDRTRVWRYHKPDGLLTTHKDPQGRQTVFESLPEGMPRVISVGRLDINSE
GLLLLTNDGELARRLELPSNAWIRRYRVRVFGVVDEKRLASLIDGFEYEGVRYGSIEAAL
DSTKGDNSWLTVSLKEGKNREIRKVMRGLNLHVSRLIRLSYGPFQLGSLKAREIEEVNGK
ILREQIPDFPTQSKNKAR
NT seq 777 nt   +upstreamnt  +downstreamnt
atgaccacacactccacatccaactctgatgaacccaaaggcgagcgcatcgccaaattt
cttgcacgtgcaggcgttgctagccgccgtgacattgaacgcatgatcgaagaggggcga
atcaaactcggcggccatcccgtgacccaccctgcaacatttgttcaatctggcgatatg
atccaagtcgatggaaaacttatcgaaaacccagatcgaacacgcgtgtggcgctatcat
aaacccgatggcctactcaccacccacaaagacccacaaggcaggcaaactgttttcgaa
tctcttcctgaaggaatgccccgcgtcatcagcgttggacgattggatattaattccgaa
gggcttctcctccttacaaatgatggagagttggctcggcgcctcgagctccctagcaat
gcatggatccggcgttatcgagtacgagtttttggtgttgttgacgaaaaacgtcttgcc
tctctcattgatggctttgagtatgaaggcgttcgctatggttcaatcgaagcagcgctc
gactctacaaaaggcgataattcgtggctaacggtcagcctcaaagaaggcaaaaaccgt
gaaatccgtaaagtcatgcgggggcttaaccttcatgtaagccgccttatccgcttatca
tacggcccttttcagcttgggtccttaaaagcaagagaaattgaggaagtgaatggaaaa
atcctccgtgaacaaatccccgattttccaacgcaatccaaaaacaaggctcgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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