KEGG   Swingsia samuiensis: E3D00_08030
Entry
E3D00_08030       CDS       T06080                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ssam  Swingsia samuiensis
Pathway
ssam03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ssam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    E3D00_08030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssam03021]
    E3D00_08030
   03400 DNA repair and recombination proteins [BR:ssam03400]
    E3D00_08030
Enzymes [BR:ssam01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     E3D00_08030
Transcription machinery [BR:ssam03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     E3D00_08030
DNA repair and recombination proteins [BR:ssam03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      E3D00_08030
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: QDH17516
UniProt: A0A4Y6UM94
Position
1690153..1690536
AA seq 127 aa
MARVTVEDCIEKVPNRFDLVLLAAQRARNMSRGEELRVDRDNDKNPVVALREIAEEKLNL
GTLRDGIVRSLARAPEPEPVDEEVMDIIPTEKNIFGLQDVSAEEEHAHMSESEAAAIEAE
LGGRGRR
NT seq 384 nt   +upstreamnt  +downstreamnt
atggcgcgtgtaaccgtcgaagattgcatcgaaaaggttccaaaccgttttgatctggtt
cttttagctgctcagcgtgcacgtaatatgtcacgtggtgaagaacttcgtgttgatcgt
gataatgataaaaacccagtcgttgctcttcgtgaaattgccgaagaaaaattgaatctg
ggcactcttcgtgatggcattgttcgctcgctagctcgtgcgccagagccagagcctgtt
gatgaagaggttatggatattattccaactgaaaaaaatattttcggccttcaggatgtt
tctgcagaagaggagcatgcccatatgtcagaaagtgaagctgctgctattgaagctgaa
cttggtggacgaggtcgtcgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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