KEGG   Swingsia samuiensis: E3D00_08450
Entry
E3D00_08450       CDS       T06080                                 
Symbol
groL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
ssam  Swingsia samuiensis
Pathway
ssam03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    E3D00_08450 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssam03019]
    E3D00_08450 (groL)
   03110 Chaperones and folding catalysts [BR:ssam03110]
    E3D00_08450 (groL)
   03029 Mitochondrial biogenesis [BR:ssam03029]
    E3D00_08450 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssam04147]
    E3D00_08450 (groL)
Enzymes [BR:ssam01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     E3D00_08450 (groL)
Messenger RNA biogenesis [BR:ssam03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     E3D00_08450 (groL)
Chaperones and folding catalysts [BR:ssam03110]
 Heat shock proteins
  HSP60 / Chaperonin
   E3D00_08450 (groL)
Mitochondrial biogenesis [BR:ssam03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    E3D00_08450 (groL)
Exosome [BR:ssam04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   E3D00_08450 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   E3D00_08450 (groL)
  Exosomal proteins of breast cancer cells
   E3D00_08450 (groL)
  Exosomal proteins of colorectal cancer cells
   E3D00_08450 (groL)
  Exosomal proteins of bladder cancer cells
   E3D00_08450 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: QDH17587
UniProt: A0A4Y6UMK2
Position
1775183..1776823
AA seq 546 aa
MAAKDVKFGADARERMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELADKFENMGAQMVREVASKTNDLAGDGTTTSTVLAQAIIREGAKAVAAGMNPMDLKRGI
DKAVEAVVEELKKNTKKITSPGEIAQVGTISSNGEREIGEMISAAMQKVGSEGVITVEEA
KGLHTELDVVEGMQFDRGYISPYFVTNPEKMTADLDNPYILIHEKKLSSLQPMLPLLESV
VQSGRPLMIIAEDVDGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAVLTGGQV
ISEDIGIKLESVTLEMLGRAKKVHIEKENTTIVEGAGNGDDIKGRCNQIRAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALA
RASVVLKGLDFANDDQRIGADIVRKALQSPLRQIAENAGEDGAVIAGKVLENNTYNFGFD
AQTGEYKDLVADGIIDPTKVVRTALQDAASVGGLLITTEAMVAERPEKKAPAGAPGGMGG
MGDMDF
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggctgctaaagacgtcaaattcggtgcagatgcacgtgaacgtatgttgcgtggtgta
gatattctagccaacgcagtaaaagtaacgcttggtccaaaaggccgtaacgttgttttg
gataagagcttcggtgcacctcgtattacaaaagatggtgtttctgttgctaaagaaatc
gagcttgctgataagttcgaaaatatgggcgcacaaatggtgcgtgaagttgcttccaaa
accaatgatctagctggtgatggcacaacgacatcaaccgtgcttgcacaagcaatcatc
cgtgagggtgcaaaggctgttgcagctggcatgaacccaatggatcttaaacgcgggatc
gacaaggctgtcgaagctgttgttgaagaacttaaaaagaacaccaagaaaatcacttcc
ccaggtgaaattgctcaggttggaacaatttcttcaaatggtgaacgtgaaatcggtgag
atgatttctgctgcgatgcagaaagttggctctgaaggcgttatcacggttgaggaagca
aaaggtcttcatacagaactcgacgttgttgagggtatgcagttcgaccgtggttatatt
tctccatacttcgtaaccaaccctgagaagatgacagctgatctggataatccttatatc
ctgatccatgaaaagaaattgtcttctctacagccaatgttgccacttcttgaaagcgtt
gtgcagtctggccgtccgctcatgatcatcgcagaagatgttgatggtgaagctcttgca
accttggtcgtaaacaagcttcgtggtggactaaaaattgctgccgttaaagcgcctggt
tttggtgaccgtcgtaaagcaatgcttgaagatattgctgtacttaccggtggacaagtt
atctctgaagatatcggcatcaagcttgaatctgtaacgcttgaaatgcttggccgtgcc
aagaaagttcatatcgaaaaagagaacacaacgatcgtagaaggtgctggtaatggcgac
gatattaaaggtcgttgcaaccagatccgtgctcagatcgaagaaacaacatctgactat
gatcgtgaaaaacttcaggaacgtcttgctaaattagcaggtggtgttgctgttattcgc
gttggtggtagcacagaggttgaagttaaagaacgtaaagaccgcgtggatgatgctctt
catgcaacacgtgccgctgttgaagaaggtatcgtccctggtggtggtacagctcttgct
cgtgcgtctgtggttctaaaaggccttgattttgcaaatgatgatcagcgtattggtgct
gatatcgttcgtaaggctcttcagtctcctcttcgtcagatcgctgaaaatgcgggtgaa
gatggtgcagtaattgctggcaaggttcttgaaaacaacacgtataactttggttttgat
gctcaaaccggtgagtataaagaccttgttgccgatggtatcatcgatccaacaaaggtt
gtccgtacagctctgcaagatgcggcatctgttggtggtctgttgattacgacagaagct
atggttgcagaacgtccagaaaagaaagctccagctggtgctccaggtggtatgggcggc
atgggtgatatggatttctaa

DBGET integrated database retrieval system