KEGG   Sphingomonas sanxanigenens: NX02_19765
Entry
NX02_19765        CDS       T03929                                 
Name
(GenBank) hypothetical protein
  KO
K20531  type IV secretion system protein TrbF
Organism
ssan  Sphingomonas sanxanigenens
Pathway
ssan02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ssan00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NX02_19765
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ssan02044]
    NX02_19765
Secretion system [BR:ssan02044]
 Type IV secretion system
  Trb secretion system protein
   NX02_19765
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: AHE55612
UniProt: W0AGF1
Position
4171749..4172549
AA seq 266 aa
MLFKRAVQRYAQTPQPETPYQRAGQVWDDRIGSARVQARNWRLMAFGTLSLSTAMSGALI
WQSLQSRVTPYVVEVDRLGEARAVTEVEVGYRPTDPQIAWHLAKFVENVRGVSLDPVLMR
RNWLSAFAFTTTRGSQFLSDYARAADPFAGIGQRTVSVQVTSVIRASDRSFQVKWTETAY
ERGSAAGSSHWTGILTIQMKPPVSADTLRKNPLGIYIDAIDWSRELEPAGSTAPTRTAPP
PSDVPLGSPLDPNLAVSPTVNPETQP
NT seq 801 nt   +upstreamnt  +downstreamnt
atgctctttaagcgcgccgtccagcgctacgcgcagacaccccaaccggagacgccctat
caacgcgccggccaggtctgggacgaccgcatcgggtcggcccgcgtccaggcccgcaac
tggcggttgatggcattcggcacgctgtcgctgtcgaccgccatgtcgggcgcactcatc
tggcagtcgctgcagagccgggtcacgccctatgtcgtcgaggtcgatcgcctgggcgag
gcacgggccgtgaccgaggtcgaagtcggctaccgccccaccgatccccagatcgcctgg
catctggcaaagttcgtcgagaatgtccgcggcgtctcgctcgatcccgtgctgatgcgc
cgtaactggctctcggcctttgcctttaccacgacgcgcggaagccagtttctcagcgat
tatgcgcgggcggcggatccgtttgccgggatcggccagcgcaccgtttcggtccaggtg
accagcgtcatccgtgcatcggatcgctccttccaggtgaagtggaccgagaccgcctat
gagcgcgggagcgcggcaggctcctcccactggaccggcatcctgacgattcagatgaag
ccgccggtatccgccgacacgctccggaagaacccgcttggcatctacatcgacgcgatc
gactggagccgcgaactcgagcctgcggggtcgactgcgcctacgcgcaccgcgccgccg
cccagcgacgtgccgctcggctcgccgctcgacccgaaccttgccgtttcaccgaccgtc
aatccggagactcagccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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