KEGG T00935: SSUBM407

Streptococcus suis BM407 (serotype 2): SSUBM407_0931

Entry

SSUBM407_0931     CDS       T00935

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

ssb Streptococcus suis BM407 (serotype 2)

Brite

KEGG Orthology (KO) [BR:ssb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssb03032]
    SSUBM407_0931 (topA)
   03400 DNA repair and recombination proteins [BR:ssb03400]
    SSUBM407_0931 (topA)
Enzymes [BR:ssb01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SSUBM407_0931 (topA)
DNA replication proteins [BR:ssb03032]
Prokaryotic type
  DNA Topoisomerases
   SSUBM407_0931 (topA)
DNA repair and recombination proteins [BR:ssb03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SSUBM407_0931 (topA)

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim DUF2996 Toprim_4 phage_tail_N HypA

Other DBs

NCBI-ProteinID:

CAZ55781

UniProt:

A0A0H3MV21

Position

1002199..1004292

AA seq 697 aa
MATKTVSKKKTTTKKNLVIVESPAKAKTIEKYLGKNYKVVASVGHIRDLKKSSMSIDFDN
NYAPEYINIRGKGPLINSLKKEAKNAKQVFLASDPDREGEAISWHLAHILGLDANDKNRV
VFNEITKDAVKNAFQEPRAINHDLVDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQ
SVALKLIIDRENEISNFKPEEYWTIDATFKKGSKKFQASFYGIDGKKTKIENNEQVKEIL
ARLDGDDFLVEQVERKERKRNAPLPYTTSTMQMDAANKINFRTRKTMMVAQQLYEGVSLG
TGGTQGLITYMRTDSTRISPVAQAQAADFITERFGATYSKHGNKVKNASGAQDAHEAIRP
SNVNLTPESIAKYLDKDQLRLYTLIWNRFVASQMAAAVFDTMSVRLGQNGVIFAANGSQV
KFDGYMAVYNDSDKNKMLPDMEQGDTVVRTSTNPEQHFTQPPARYSEATLIKTLEENGVG
RPSTYAPTIETIQKRYYVKLAAKRFEPTELGEIVNKLIVEFFPDIVNVKFTADMEQKLDD
VEIGKEQWQKVIDGFYQPFKVELSKAEEQMEKIQIKDEPAGFDCDVCGHEMVIKLGRFGK
FYACSNFPDCRNTKQITKEIGVTCPVCQQGQVIERKSKRNRLFYGCDRYPECEFTSWDKP
VGRACPKCDHYLVEKKVRGGGKQVVCPNGDYEEDKIK

NT seq 2094 nt +upstreamnt +downstreamnt
atggctacaaaaacagttagtaagaaaaaaacaacaaccaagaaaaatctcgttattgta
gagtcacctgctaaggcaaaaacaatcgaaaaatatcttggtaaaaattataaggtcgtt
gcttcagtcgggcatattcgagatttgaagaaatctagtatgtctattgactttgataac
aactatgcacctgagtacatcaacatacgtggaaaaggaccactcatcaattctttgaaa
aaagaagcaaaaaatgctaagcaagtctttctcgcgagtgacccggaccgcgaaggagaa
gcaatttcttggcatttggctcacattttgggattggacgcaaacgataaaaaccgtgtt
gtctttaatgaaattacaaaagatgcagtaaaaaatgcttttcaggagccgcgcgctatc
aatcatgacttggtagatgcccagcaagctcgtcgcgtcttagaccgtattgtagggtac
tccatatcacctattttatggaagaaagtcaaaaaaggtctgtcagcaggacgtgttcaa
tcggttgctctcaaattaataatcgaccgtgaaaatgaaatcagcaatttcaaaccagaa
gaatattggacaattgatgcaaccttcaaaaaggggagcaagaaattccaggcttctttc
tacggtatagatggaaagaaaactaaaattgaaaacaatgagcaggttaaagaaattctc
gcccgacttgatggggatgatttcttagtagaacaggttgagcgtaaggaacgcaaacga
aatgcacctctgccttacacaacttctactatgcagatggatgcggctaataaaatcaat
ttccgtactcgtaaaaccatgatggttgcccaacaactttatgagggtgtcagtcttggc
acaggtggtacccaaggtttgattacctatatgcgtacggattcaacacgtattagccct
gttgcacaagcacaagctgctgactttatcacggagcgttttggtgctacctattcaaag
catggtaataaagtaaaaaatgccagtggtgcacaagatgcccacgaagccattcgtcca
tcaaatgttaacttaacacctgaatcaattgcaaaatatctggacaaggaccagttgcga
ctatatacactgatttggaatcgttttgtcgcaagtcagatggctgcagcggtctttgat
accatgagtgttcgtctaggtcaaaatggagtgatttttgctgccaatggtagccaagtt
aaatttgatggttacatggcagtctataatgattctgacaagaataagatgttgccagat
atggagcaaggtgatacagttgtacgtacatcaacaaatcctgaacaacattttacgcag
ccaccagctcgctattctgaagctactttgattaagactttggaagaaaatggtgttggt
cgtccgtcaacctatgcaccaaccattgaaaccattcagaaacgctactatgttaagtta
gctgctaagcgatttgaaccgactgaactcggcgaaatcgttaataagctgattgttgaa
ttcttcccagatattgtcaatgtcaaatttacagccgatatggaacaaaaattggatgat
gtagaaatcgggaaagagcagtggcagaaggtcattgatggtttctatcagccattcaag
gtagaattatctaaggcagaagaacagatggaaaaaatccaaattaaggatgaaccagct
ggctttgactgtgatgtttgtggacatgaaatggtcattaaactaggtcgttttggaaaa
ttctatgcttgtagtaatttccccgattgccgcaataccaagcaaattaccaaggagatc
ggcgtaacttgccccgtgtgtcaacaaggccaggtcattgaacgaaagagcaaacgcaat
cgacttttctatggttgtgaccgttatccagagtgtgaatttacctcatgggataaacct
gttggtcgtgcctgtccaaaatgtgaccactatcttgtcgagaaaaaagttcgtggtggt
ggtaaacaagttgtctgtccaaatggtgactacgaagaagacaagattaaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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