KEGG   Sus scrofa (pig): 100156229
Entry
100156229         CDS       T01009                                 
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X2
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03020  RNA polymerase
ssc04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100156229 (POLR3A)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    100156229 (POLR3A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssc03021]
    100156229 (POLR3A)
Enzymes [BR:ssc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     100156229 (POLR3A)
Transcription machinery [BR:ssc03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     100156229 (POLR3A)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 DUF3654
Other DBs
NCBI-GeneID: 100156229
NCBI-ProteinID: XP_001929395
Ensembl: ENSSSCG00000010327
UniProt: F1S2E6 A0A4X1SJU1
Position
14:complement(80410143..80471740)
AA seq 1390 aa
MVKEQFRETDVAKKISHICFGMKSAEEMRQQAHIQVVSKNLYSQDNNHSPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQE
ERKQFLDYLKRPGLTYLQKRGLKKKISDKCRKKNTCHHCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSNFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANITFLRKLVRNGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQV
FSVILRPSYDNPVRANLRTKGKQYCGKGEDLCVNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YRKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCQSEPALSKNELLLTTESIMKKNEFLC
CQDSFLQEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILIKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTQTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKANRDPSPPRRPLIFD
TDEFHIPLVT
NT seq 4173 nt   +upstreamnt  +downstreamnt
atggtgaaggagcagttcagagagacggatgtggccaagaaaataagccacatctgtttt
ggaatgaagtcagctgaggagatgcgccagcaggcgcacatccaggttgtgagtaagaac
ctatacagccaggacaataaccactcccccctgctgtacggggtgcttgaccacaggatg
ggcacgagtgagaaggatcgtccttgtgaaacctgtgggaagaacttggctgactgtctg
ggccactatgggtacattgacctggaactgccatgctttcacgtggggtacttccgtgca
gttataggcatcttacagatgatctgtaaaacctgctgccacatcatgctgtcccaggag
gagaggaagcagtttctggattatctaaagaggcctggcctgacctacctccagaagcgg
gggctaaagaagaaaatctctgataagtgccggaagaagaacacgtgccatcactgtggc
gccttcaacggtactgtaaagaagtgtggattactaaagatcatccacgagaaatacaag
accaacaagaaagtggtggatcccatcgtgtcaaatttccttcagtccttcgaaaccgcc
atcgagcataacaaagaagtagagcctctgctgggaagggcgcaggaaaacttgaatccc
ttagtagttctgaatttatttaaaagaatcccagctgaagatatccctctactcctgatg
aatccagaagctggaaagccctctgatttgattctcacgcgacttttagtgccccctttg
tgtatcagaccctctgtcgtgagtgatttgaagtctggcaccaatgaggatgatctgacg
atgaaattgaccgaaatcatttttctaaacgatgtcatcaaaaagcatcggatatcagga
gctaagacccagatgatcatggaagactgggatttcctgcagctgcagtgtgccctctac
attaacagcgagctctcaggcattcccctcaacatggcgcccaagaaatggaccagaggg
ttcgtccagcgcctgaagggaaaacagggtcgatttagaggcaatctctcaggaaagaga
gtggatttttctggcagaacagtcatctcacctgaccccaacctccgaattgatgaagta
gctgttccagtccacgtggccaagatcctaacttttcctgagaaggtgaacaaagcaaac
atcacctttttgaggaaactggttcggaatggccctgaagttcacccaggagccaatttc
attcagcagagacacacacagatgaaaaggtttttgaaatatggaaatagagaaaagatg
gctcaggagctcaaattcggggatatcgtggagagacaccttatagatggagatgtggtc
ttgttcaaccgacagccctcactgcacaaattgagcattatggcacatctggccagggtc
aagccccaccggaccttcagatttaatgagtgtgtctgtacaccatacaatgcggatttt
gatggtgatgaaatgaaccttcatcttcctcaaacagaagaagctaaagcagaagccctt
gttctgatggggactaaagcaaatcttgtaactccaaggaatggagaaccactaattgct
gctattcaagattttctgacaggtgcctacctcctcactcttaaggacactttctttgac
cgagccaaggcttgtcaaatcattgcttcaatattggtgggcaaagatgagaaaatcaaa
gttcgcctgccgccacctacaatactaaagcccgtcaccctgtggacaggaaagcaggtg
ttcagcgtcatcctcagacccagctatgacaatccagtgagggccaacctccgaaccaag
ggcaagcagtactgtggcaaaggagaggatctctgtgtcaacgattcctacgtcactatc
cagaacagcgagttgatgagtggcagcatggacaaaggcaccctgggatcaggatccaag
aacaatattttttacattttgctgcgagactgggggcagaatgaagctgccgatgcaatg
tcacggcttgccaggctggctcctgtctacctctctaaccgtgggttctctattgggatt
ggtgatgtcacacctggccaaggactgctgaaggccaagtacgagttgctgaacgctggc
tacagaaaatgtgatgagtacattgaggccttgaacacaggcaagctgcagcagcagccc
ggctgcactgcagaggaaaccctggaggctttgatcctgaaggagctgtctgtgatccgt
gaccatgctggcagcgcctgcctccgggagctggacaagagcaacagccccctcaccatg
gctctgtgtggctccaaaggttccttcattaacatatcacagatgattgcctgtgtggga
cagcaagctatcagcggctcccgagtgccagatggctttgaaaacaggtccttgcctcac
tttgaaaaacactcaaagctgccagctgccaaaggctttgtggctaatagcttttactcc
ggtttgacaccaaccgagtttttcttccacacgatggctggccgggaaggtctggtcgac
acagccgtgaagacagctgaaacaggatacatgcagagaaggctcgtaaagtcccttgaa
gatctttgctcccagtatgatttgacagtccgaagctccacaggagatatcatccagttc
atttacgggggagatggcttagatcctgcagccatggagggaaaagatgaacccctggag
tttaaaagggttctggacaacatcaaagcagtcttcccgtgccagagcgagcctgccctc
agtaaaaacgagctactcctgaccacggagtccatcatgaagaagaacgagtttctctgc
tgccaggacagcttcctgcaggaaataaaaaaattcattaagggggtttctgagaagatc
aagaaaaccagggataaatatggcatcaatgataacggcacgacagagccccgtgtactg
taccagttggaccggatcacccctacccaaatagaaaagtttctagagacgtgtagggac
aagtacatgagggcacagatggagccgggttctgcggtgggtgcactttgtgcccagagc
attggtgagccaggcacccagatgaccctgaagactttccactttgctggtgtggcctcc
atgaacatcaccctgggcgtcccccgcatcaaagagatcatcaacgcttccaaagccatc
agcacgccaatcatcacagcccagctggacaaggatgacgatgcagattacgctcgcctc
gtgaaagggaggattgagaaaaccctcttgggggagatttcggagtatattgaagaggtc
tttcttcctgacgattgctttattctcatcaagctctccctggaacggatcagacttctg
agactggaagtgaacgctgagacggtgaggtattccatctgcatgtccaagctccgagtg
aagcctggcgacgtggcggtccacggtgaggctgtggtatgtgtcaccccccgagagaac
agcaagagctccatgtactacgttctgcagtttctgaaggaggatctccccaaggtggtg
gtgcagggcatcccagaggtgtcccgagctgtcatccacattgacgagcagagcggaaag
gagaagtacaagctcctggtggagggtgacaacctgcgggcagtcatggccacccatggg
gtgaagggcacccagaccacctccaacaacacctatgaggtggagaaaactctgggcatc
gaagctgcccggacgaccatcatcaacgaaatccagtacacgatggtcaaccacggcatg
agcattgaccggcggcatgtgatgctgctctctgaccttatgacctacaagggtgaagtc
ctgggcattactagatttggcctggccaagatgaaggagagcgtgctgatgctggcctcc
tttgagaagaccgccgaccacctctttgacgctgcctattttgggcagaaggactccgtg
tgtggggtgtctgaatgcatcatcatggggatccccatgaacatcggaaccgggctcttc
aagctgctccacaaggccaacagggacccgagccctcctaggaggcctctgatcttcgac
acagatgaattccacatccctcttgtcacatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (38)   

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