KEGG   Sus scrofa (pig): 100510925
Entry
100510925         CDS       T01009                                 
Symbol
LNX2
Name
(RefSeq) LOW QUALITY PROTEIN: ligand of Numb protein X 2
  KO
K10692  ligand of Numb protein X 1/2 [EC:2.3.2.27]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100510925 (LNX2)
Enzymes [BR:ssc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100510925 (LNX2)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    100510925 (LNX2)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 zf-rbx1
Other DBs
NCBI-GeneID: 100510925
NCBI-ProteinID: XP_013845222
Ensembl: ENSSSCG00000009308
UniProt: A0A8D1JQI4
Position
11:complement(4960237..5004186)
AA seq 690 aa
MGTTSDEMVSVDPNSSSSSFNPLCFECGQQHWTRENHLYNYQDEVDDDLVCHICLQPLLQ
PLDTPCGHTFCCKCLRNFLQEKDFCPLDRKRLHFKLCKKSSILVHKLLDKLLVLCPFSSV
CQDVMQRCDLEAHLKNRCPGASLRRAALERRKRSKAQSEVESESGAAVPELPVTLPPDVD
GAGPGLAPAERTPTPAPLPAWPEEPGLDNPAFEESPAADAAQQPLSLPEGEITTIEIHRS
NPYIQLGISIVGGNETPLINIVIQEVYRDGIIARDGRLLAGDQILQVNNHDISSVSHNYA
RAVLSQPCSTLQLTVLRERRFGGRAHGQAEGGAAREEVFQVVLHKRDSAEQLGIKLVRRT
DEPGVFILDLLEGGXAAQDGRLSSNDRVLAINGHDLKHGTPELAAQVIQASGERVNLTIA
RPGKPQPGNSVREAGAQSSSQHHAQPLCYSRPGSHKDLSQCVTCQEKHITIKKEPHESLG
MTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGDILLNINGIDLTNLSHSEAVAMLK
ASTASPTVALKALEVQVVEEATQGPDEQPSTFSENEYDASWSPSWVMWLGLPSALHSCHD
VVLRRSYLGSWGFSIVGGYEENHTNQPFFIKTIVLGTPAYYDGRLKCGEMIVAVNGLSTV
GMSHSALVPMLKEQRNKVTLTVICWPGSLV
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgggaacgacgagtgatgagatggtgtctgtggacccgaactcctcctcctcctccttc
aatcccctgtgtttcgagtgtggccagcagcactggacgagagaaaaccacttgtacaat
taccaggacgaagtggacgatgacctggtgtgccacatttgccttcagcctctgctgcag
ccgctggataccccctgtggacacacgttctgctgcaagtgcctccggaacttcctgcag
gagaaggatttctgtccattggaccggaagagacttcactttaagttgtgtaagaagtct
agcattctagttcataaactcctggacaaattattggttttatgtccgttttcttcagtg
tgccaagatgtaatgcagcgctgtgacctggaggcacatctcaaaaacagatgccctgga
gcgtctctccggagagctgccctggagaggaggaagcgcagcaaagcgcagtcggaggtc
gagagtgagagcggagctgcggtccccgagcttccagtgaccctaccgcccgacgtggac
ggtgcggggcccggcctggcgcctgcggagcggaccccgacgcccgcgccccttccggcc
tggcccgaggagccaggcctggacaacccggctttcgaggagagccccgcggccgacgcc
gcacagcagccactcagtttaccagaaggcgaaatcaccacgattgagattcaccgctct
aatccttacattcagctaggaattagcatcgtgggcggcaacgaaacgccgctgattaac
atcgttatccaggaagtctatcgggatggcataatcgccagggacggaagactcctggcc
ggggaccagattcttcaggtcaacaaccacgacatcagcagcgtgtcgcacaactacgcc
cgcgcggtgctgtcgcagccctgcagcacgctgcagctcaccgtgctccgcgagaggcgc
ttcggcggccgcgcgcacggccaggccgagggcggcgcggcgcgcgaggaggtcttccag
gtggtcctgcacaagcgggactcggccgagcagctgggcatcaagctcgtgcgaaggacc
gacgagccgggcgtcttcatcctcgacctgctggaggggggcntggccgcgcaggacggg
aggctcagcagcaacgaccgcgtgctggccatcaacgggcacgacctgaagcacggcacg
cccgagctggccgcccaggtcatccaggccagtggagagagggtgaatttaaccatcgct
cgaccaggaaaaccccagcctggaaactcggtccgagaagcaggagctcagagcagcagc
cagcaccacgcgcagccgctgtgttacagcaggcctggctcacacaaggacctctcccag
tgtgttacatgccaagaaaaacacatcactataaagaaggaaccacacgagtcccttggc
atgaccgtcgcggggggccgaggaagtaagagtggggagctgcccatctttgtgaccagc
gtgccacctcatggctgccttgcacgtgatggcagaatcaagagaggtgacatcttgctg
aacatcaacggcattgatctgaccaacttaagtcacagcgaggccgtcgctatgctgaaa
gccagcaccgcgtcccccacggtggccctgaaggcactggaggtgcaggttgtggaggag
gccacccagggcccagatgaacagccgagcactttcagcgagaacgagtacgatgccagc
tggtccccgtcgtgggtcatgtggctggggctgcccagtgcccttcacagctgccatgat
gtcgtcttgcgaagaagctacctgggaagttggggcttcagtattgttggtggctatgaa
gagaaccacaccaaccagcctttcttcattaaaaccatcgtcctgggcactcccgcctat
tatgatggaagattaaagtgtggcgaaatgatcgtggcggtgaacggcctgtccacggtg
ggcatgagccactcggcgctggtgcccatgctgaaggaacagaggaacaaagtcacgctg
actgtcatttgctggcctggcagcctggtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (36)   

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