KEGG   Sus scrofa (pig): 100512175
Entry
100512175         CDS       T01009                                 
Symbol
CATSPERB
Name
(RefSeq) cation channel sperm-associated protein subunit beta
  KO
K16893  cation channel sperm-associated protein subunit beta
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ssc03037]
    100512175 (CATSPERB)
   04040 Ion channels [BR:ssc04040]
    100512175 (CATSPERB)
Cilium and associated proteins [BR:ssc03037]
 Motile cilia and associated proteins
  Sperm associated proteins
   100512175 (CATSPERB)
Ion channels [BR:ssc04040]
 Voltage-gated cation channels
  Calcium channel, sperm-associated (CatSper)
   100512175 (CATSPERB)
SSDB
Motif
Pfam: CATSPERB CATSPERB_2nd CATSPERB_1st Sortilin-Vps10
Other DBs
NCBI-GeneID: 100512175
NCBI-ProteinID: XP_020955279
Position
7:complement(113201785..113293597)
AA seq 1105 aa
MELLFLYVMILLLNMFDFSSGITYNKGDMENRFACASQGFPQKNEIIKLYLFSDDLKIQC
FFQSENELTSREFLSVFTSGGLAPSLGIINSTYTGIFHFNLTLFSDRVYWLIDIPRENIT
KNTDIAAVEEWLVRITLQHGLNIYNTEGTLLDRVREPILQWKLGTMMTRNNISKVYPHVV
DLKVTKCPCANDVALLGFIMDSTLDGVYIGLSFSGFWNYNDTTWYNLTDMIYSQVGEEHT
ELSVVDMVLANHFLVILTSLGLFISGDLRYPSSSVLLFSRAEFCGFERVDYIKGKLWYNE
RCFANRERFEVDYITITFERNRTLSEASSCFYSKEPFLEWLPCLPSISKRMKTIPSTVIT
FLIDQEQSSGIYLFQNQKNTTASVRIFRNNRPRLRQKFPLFSFPSSFSSPVGMVFHPRSH
FLYAYGNQVWLSVDGGNTFELLADFHDDIIKNVYHSFYTSDITFVSQSGKVYSTKAGLGR
YTEIGSISDQIFTLYYDHMGFIHKLTPDHFEASGSFGAFGNSKGIFGQAPDMGFETALAP
QHITLNEMIFYAYVPENEPQGSIYTKKFNEIHFGKVIHSRKTGTAYIREILYHDTPKGFL
SSVIAEMIDPFGIEAVHESSCLSSSLSINQAGNFFYKLSLQLQTSGDTSSFQDSDIEKTV
VIPGYSSFLITRILDNENALAIATMPGRVPNNMTFLKDSWFLYNFGQRNGRTWKIYSKPC
NYWFQQQDGSLSLNVLKYIDLGKSHSFKIKVIPNTKSVRTLEIPLLKVIVGNPNLLEVKA
KGYFDDTDSYLMEISAASKTLRQGSTSLAFIVWGASTECFVTTIVPTLKSSCSYLKSMHH
IPSEFIPLEDWNSGVHVDSQGFNMIKVLPVNYRPPSNMGIAIPLTDNFYHADPSQPIPRN
LFHKSKKSGKFKQCANASTREECNCTNNQKFSYAVGFSDCREKVPRFKFPVTQYPISLKI
YNEDGYIPVETPYLVTVAEVNNRENWKLKQSVPENVKKLKDYLGLILHAPVYNPLGLNLS
VKGSELFHFRVSVVPGVTFCNLVEEFQIYVDEAPLPFPGHTLIAVAAAVVLGGLIFIAFM
FQIHNSHPYQQLSKTDSVNLGVSAT
NT seq 3318 nt   +upstreamnt  +downstreamnt
atggaattgctatttttatatgttatgattttacttttgaacatgtttgatttttcatca
ggaataacatataacaaaggtgatatggagaatcgctttgcttgtgctagccaaggtttc
ccccaaaagaatgaaataatcaagttgtatcttttctctgatgatttgaaaatccagtgt
tttttccagtctgaaaatgagcttacttcaagggaatttctaagcgtgttcacatcagga
ggacttgctcccagcttgggaatcataaatagtacatatacaggcatcttccactttaat
ttaactttgttcagtgatcgggtttactggttgattgatattcccagagaaaacattacc
aaaaatacagatattgcagctgtagaagaatggttagtcaggatcactttacaacacgga
ttaaatatttataatactgaaggaacgctattggatagggttcgagaacctattcttcag
tggaaacttgggactatgatgacaagaaacaacatcagtaaagtatacccacatgtggta
gatctcaaagtgacgaaatgcccttgtgccaatgatgtggccttacttggcttcattatg
gattcaactcttgatggtgtttacataggcctcagcttttctggattttggaattataat
gataccacgtggtataacctgacagacatgatctactcccaagttggagaagagcacaca
gagctttcagtggtggatatggttctagcaaatcattttttagttatcctcacctctttg
ggtctttttataagtggagatcttcgctatccatcatcctctgtcttactgttttcaagg
gcagagttttgtggtttcgaaagggttgactatatcaaaggaaaactgtggtataatgaa
agatgttttgctaacagagaacgttttgaagtcgattatattaccatcacctttgagaga
aacaggaccctaagtgaggcaagctcttgtttttatagcaaagaaccatttcttgaatgg
ctaccttgcttaccttccatttcaaaaagaatgaaaactattccatcaactgtgataaca
tttcttattgaccaagaacaaagttctggcatctacctcttccagaaccagaaaaatacc
actgcctctgtgaggatctttagaaacaacagaccaagattaagacaaaaatttcccctt
ttctcatttccttcgtcattctcttctcctgttggaatggtgttccacccacgaagccat
tttctgtatgcctatggtaatcaggtatggctttcagttgatggtggcaacacttttgaa
ttattagctgactttcatgatgacatcataaagaatgtttatcatagtttttatacttcg
gatattacttttgtttcccaaagtgggaaggtttactccacaaaggcaggattaggaaga
tatactgaaatcggatccatctctgatcagattttcacattatactatgaccacatggga
ttcatacataaactgactccagatcattttgaagctagtgggtcatttggtgcctttgga
aattctaaaggtatttttggacaggctcctgacatgggctttgagacagcccttgctccg
cagcatatcaccttaaatgaaatgatcttttatgcatatgtgcctgagaatgaacctcag
ggaagtatctacaccaagaaattcaacgagattcactttggaaaagtgatacactccagg
aaaactggaacagcttacataagagagatattgtaccatgacacccctaaaggatttttg
tcctcagttattgcagaaatgatagacccttttggaatagaggcagtacatgaaagctct
tgtttgtctagttccctttccattaatcaagctggaaatttcttctataaacttagtctt
caattacaaacttcaggtgatacgtcctcatttcaagattcagatatagagaagactgtg
gtgattcctggttacagcagcttcctgatcacaaggattttagataatgagaatgcttta
gctattgctactatgcctggaagagtacccaacaatatgacctttctgaaagactcctgg
ttcttatacaactttgggcaaaggaatggccgaacatggaagatatattcaaaaccatgt
aattactggtttcagcaacaagatggctcactgtccctcaacgtcctgaaatatattgac
ctggggaaatctcattcttttaaaattaaggtcatacctaatacaaaaagtgttcgaacc
cttgaaataccactattgaaagtaattgtgggaaacccaaatttgttggaagttaaagct
aaaggctattttgatgatactgatagttatctaatggaaatttctgcagctagcaaaact
ttacgacaaggttcaacttcactggcatttattgtctggggagcgtcgactgagtgcttt
gttacaacaatcgtgccaaccttgaaaagcagctgtagttatctcaagtctatgcatcac
atccctagtgaatttattccgttggaagactggaacagtggagttcacgtggacagtcag
ggttttaatatgatcaaagttttgccagtaaactacaggcctccctctaatatgggaatt
gctattccactcacagataatttttatcatgcagatcctagccaacctataccaagaaat
ctatttcacaagtcaaagaaatctggtaaattcaaacagtgtgctaatgcatctactcga
gaggagtgtaattgcacaaacaatcagaagttttcatatgctgttgggttctcagattgc
agagaaaaggttccccgttttaagtttccagttacacaatatccaatttctttgaaaatt
tacaatgaagatggatatatcccagtggaaacgccatacctggttactgtggctgaagta
aataacagggaaaactggaaactaaaacaatctgtgccagaaaatgtgaaaaaactgaaa
gactacttaggactgattcttcatgctccagtgtataatcctttaggcctcaatttaagt
gtaaaaggctctgagctctttcacttcagagtgtctgtcgttccaggggtcacgttttgt
aacttagttgaagaatttcagatttatgtcgatgaagcacctctgccgtttcctggacac
acacttattgccgttgcagcagctgtagtgctggggggattaatttttatagcatttatg
ttccaaatacataacagccacccataccaacaactgtctaaaacagacagtgtgaactta
ggtgtcagtgccacctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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