KEGG   Sus scrofa (pig): 100512857
Entry
100512857         CDS       T01009                                 
Symbol
CHMP6
Name
(RefSeq) charged multivesicular body protein 6
  KO
K12195  charged multivesicular body protein 6
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03250  Viral life cycle - HIV-1
ssc04144  Endocytosis
ssc04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100512857 (CHMP6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100512857 (CHMP6)
  09143 Cell growth and death
   04217 Necroptosis
    100512857 (CHMP6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100512857 (CHMP6)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100512857 (CHMP6)
Membrane trafficking [BR:ssc04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    100512857 (CHMP6)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100512857 (CHMP6)
  Exosomal proteins of other body fluids (saliva and urine)
   100512857 (CHMP6)
SSDB
Motif
Pfam: Snf7 Cas_Cas1 Het-C
Other DBs
NCBI-GeneID: 100512857
NCBI-ProteinID: XP_020922158
Ensembl: ENSSSCG00000017140
Position
12:complement(1691821..1698347)
AA seq 201 aa
MGNLFGRKKQSRVTEQDKAILQLKQQRDKLRQYQKRITQQLEREREIARQLLRDGRKERA
KLLLKKKRYREQLLDKTENQITSLETMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSI
EEVERILDETQEAVEYQRQIDELLAGSFTQEDEAAILEELDAITQEQVALPEVPSEPLPE
TIPEKVPGKARPRRAEPVAAS
NT seq 606 nt   +upstreamnt  +downstreamnt
atgggcaacctgttcggccgcaagaagcagagccgggtcaccgagcaggacaaggccatc
ctgcaactgaagcagcagcgggacaagctgaggcagtaccagaagcggatcacgcagcag
ctggagcgggagcgggagatcgcccggcagctcctgcgcgacggcaggaaggaacgggcc
aagctgctgctcaagaagaagcggtaccgggagcagctcctggacaagacggagaaccag
atcaccagcctggagaccatggtccagagtattgagttcacccagattgaaatgaaggtg
atggaggggctgcagtttgggaacgagtgtctgaataagatgcaccaggtgatgtccata
gaggaggtggagcgcattctggacgagacccaggaggccgtggagtaccagcggcaaata
gatgagctgttggcaggcagcttcacccaggaggacgaggctgccatcctggaggagctg
gacgcgatcactcaggaacaggtggcgctcccggaggttccttcagagccccttcctgag
acgatcccagagaaagtccctggcaaggccaggcccaggcgggcagagccggtggcagcc
tcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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