KEGG   Sus scrofa (pig): 100515171
Entry
100515171         CDS       T01009                                 
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
  KO
K04834  voltage-gated sodium channel type II alpha
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    100515171
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssc04040]
    100515171
Ion channels [BR:ssc04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   100515171
SSDB
Motif
Pfam: Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH ATP-synt_B IQCJ-SCHIP1 IQ
Other DBs
NCBI-GeneID: 100515171
NCBI-ProteinID: XP_003133492
Ensembl: ENSSSCG00000015905
UniProt: A0A286ZLY4
Position
15:71864753..71999219
AA seq 2006 aa
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNSSL
DGNGTTFNRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEDGVHKSESEDSIRKKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLIGGP
SALTSPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTARQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGLIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKR
KLREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEVEPEESLEPEACFTEDCVRKFKCCQISIDEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWIAYGFQVYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIESNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSCIYKKDKGKEGDGTPIKEDILTDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq 6021 nt   +upstreamnt  +downstreamnt
atggcacagtcagtactggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaagag
cgcaaggatgaggatgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatttatggagacatccctccagagatggtgtcagagccgctggaggac
ctggacccatactatatcaataagaaaacatttatagtattgaataaagggaaagcaatt
tctcgattcagtgccacccctgccctgtacattttaactcccttcaaccctattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcattatgtgcactattctt
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtggagtac
acctttacaggaatttatacttttgaatcacttataaaaatacttgcaaggggcttttgt
ttagaagatttcacatttctacgggatccatggaattggttggatttcacagtcattact
tttgcatatgtgacagaatttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcattgaaaacaatttcagtcattccaggcctgaagaccatcgtgggggcc
ctaatccagtcggtgaagaagctctcagatgtaatgatcctgactgtgttctgtctgagc
gtgtttgcactaataggattacagctgtttatgggcaacctgcgaaataaatgtttacaa
tggcccccagataattcttcctttgaaataaacatcacttccttctttaatagctcattg
gatgggaacggtaccactttcaataggacagtgagcatgtttaactgggatgaatatatt
gaagataaaagtcacttttattttttggaagggcaaaacgatgctctgctttgtggcaac
agctcagatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtcgaaacccc
aactatggctacacaagctttgacacttttagctgggctttcttgtccttatttcgtctc
atgactcaagacttctgggaaaacctttatcaactgacactacgtgctgctggaaaaaca
tacatgatattttttgtgctggtcattttcttgggctcattctaccttataaatttaatc
ctggctgtggttgccatggcctatgaggaacagaaccaggcaacactggaagaggctgaa
cagaaagaagctgaatttcagcagatgcttgaacaattaaaaaagcaacaagaagaagct
caggcagcagctgcagcagcatctgctgaatcaagagacttcagtggtgctggcgggata
ggggttttctcagaaagttcttcagtagcatcaaagttgagctccaagagtgaaaaagag
ctgaaaaacagacggaagaaaaagaaacagaaagaacagtctggagaagaagaaaaggaa
gatggggtccacaaatctgaatccgaagacagcataagaaaaaaaggtttccgtttttcc
ttagaaggaagcaggctgacatatgaaaagaggttttcctctccacaccagtctttattg
agcatccgtggctcccttttctctccaagacgcaacagtagggctagccttttcagcttc
agaggtcgagccaaggatattggctctgagaatgactttgctgatgatgagcacagcacc
tttgaagacaatgacagcagaagagactctctgtttgtgccgcacagacacggggagcgg
cgccacagcaacgtcagccaggccagccgtgcctccagggtgctccctattctgcccatg
aacgggaagatgcacagcgctgtggattgcaatggcgtggtctccctgatcggaggccct
tctgccctcacatctcctgctgggcagctcctgccagagggcacaactactgaaacagaa
ataagaaagagacggtccagttcttatcatgtttcaatggatctgttggaagatcctaca
gcaaggcaaagagcaatgagtatggctagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccctgctggtataaatttgctaacatgtgtttgatttgg
gactgctgtaaaccatggttgaaggtgaaacatctcgtcaacctggtcgtaatggaccct
tttgttgacctggccatcaccatctgcattgtcttgaatacccttttcatggccatggag
cactatcccatgacagagcagttcagcagtgtgctgtcagttgggaacctggtcttcact
gggatctttacagcagaaatgtttctcaagataattgccatggatccgtattattacttt
caagaaggctggaatatttttgatggtttaattgtgagccttagtttaatggaacttggt
ttggcaaacgtggaaggattatcagttctccgatcatttcggctgcttagagttttcaaa
ttggcaaaatcttggccaacactgaacatgctgataaagatcattggtaactcagtcgga
gctctgggtaacctcaccttggtgttggccatcatcgtcttcatttttgctgtggttggc
atgcagctctttggcaaaagctacaaagaatgtgtctgtaagatttccaatgattgtgaa
ctcccgcgctggcacatgcatgacttcttccactctttcctgattgtgttccgggtgctg
tgtggagagtggatagagaccatgtgggactgcatggaggtcgctggtcaaaccatgtgc
cttactgtcttcatgatggtcatggtcattggaaacctggtggttctgaacctcttcctg
gccttactcttgagttcattcagttctgacaatcttgccgccactgacgacgataatgaa
atgaataatctccagattgccgtgggaaggatgcagaaaggaatcgattatgttaaaaga
aaattacgtgaatttattcagaaagcctttgttagaaagcagaaagctttagatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgtatttccaaccatacgaccata
gaaataggcaaagacctcaattatctgaaagatggaaatggaactaccagtggcataggc
agcagtgtagaaaagtatgtcgtggatgaaagtgattacatgtcatttataaacaatccc
agcctcacagtgactgtaccaattgctgttggagaatctgactttgaaaatttaaacact
gaagaattcagcagcgagtcagatatggaggagagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcacagttgatataggagctcccgctgagggagaacaacctgaggtt
gaacctgaagaatctctggagcctgaagcctgttttacagaagactgtgtgcggaagttt
aagtgttgtcaaataagcatagatgaaggcaaagggaaactctggtggaacctgagaaaa
acttgctacaagatagtggagcataactggtttgaaacattcatcgtcttcatgattctg
ctcagcagcggggcactggcctttgaagatatatatattgaacagcgaaaaaccattaag
accatgttagaatatgccgataaagttttcacttatatattcatcctggaaatgcttctc
aagtggattgcatatggctttcaagtgtattttaccaatgcctggtgctggctagatttc
ctgattgtcgatgtctcattggttagcttaactgcaaatgctttgggttactccgaactt
ggtgccatcaaatccctcagaacactaagagctctgaggccattgagagccttatcccga
tttgaaggaatgagggttgttgtcaatgctcttttaggagccattccatccataatgaat
gtacttctggtttgtctgatcttttggttaatattcagtatcatgggagtgaatctcttt
gctggcaaattttatcactgtattaactacaccactggagaaatgtttgatgtcagtgtg
gtcaacaactacagcgagtgtaaggccctcatagagagcaacgaaactgctcggtggaag
aatgtgaaagtcaactttgataatgtgggacttgggtatctttctctgcttcaagtagcc
acatttaagggatggatggatatcatgtatgctgctgttgattcacgaaatgtagaatta
caacccaagtatgaagacaatctgtacatgtatctttattttgtcatctttattattttt
ggttcgttctttactctgaatcttttcattggtgtcatcatagataacttcaaccaacag
aaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaaaaagctgggttcaaagaaaccacagaaacccatacctcgacctgctaacaaa
ttccaaggaatggtctttgattttgtaaccaaacaagtctttgatatcagcatcatgatc
cttatctgcctcaacatggtcaccatgatggtggaaactgatgaccagagtcaagaaatg
acaaacattctatactggattaacctggtatttattgttctgttcactggagaatgtgtg
ctgaaactaatttctcttcgttattactatttcaccatcggatggaatatctttgatttt
gtggtggtcattctctccattgtaggtatgtttctggctgagctgatagagaaatatttt
gtgtcccctaccctgttccgagtgatccgtcttgccaggattggccgcatcctgcgtctg
atcaaaggggccaaggggatccgcacgctgctctttgctttgatgatgtccctgcctgcg
ctgttcaacatcggcctcctgctcttcctggtcatgttcatctacgccatctttggaatg
tccaacttcgcctatgttaagagggaggtgggaattgatgacatgttcaactttgagacc
tttggcaatagcatgatctgcctgttccagatcaccacctctgctggctgggatggactg
ctagcacctattcttaatagtgggcctccagactgtgatcctgaaaaagatcaccctggc
agctcagttaagggagactgcgggaacccatctgttgggattttcttctttgtcagttac
attatcatatcatttctggtcgtggtgaacatgtacatcgctgtcatcctcgagaacttc
agtgttgctactgaagaaagtgcagagcccctgagtgaggatgactttgagatgttctat
gaggtgtgggagaagtttgatcccgatgccacccagttcatagagttctccaagctctca
gattttgcggctgccctggatcctcctctcctcatagcaaaaccaaacaaagtccagctc
attgccatggatctgcctatggtcagtggagacaggatccactgcctcgacattttattt
gcttttacaaagcgtgttttgggtgagagtggagagatggatgctcttcgaatacagatg
gaagaaagattcatggcctcaaacccctccaaagtctcctatgaacccattacaaccact
ttgaaacgcaaacaagaggaggtgtctgctattgttatccagagggcttatagacgctac
ctcttgaagcaaaaggttaaaaaagtttcgtgtatatataaaaaggacaaaggcaaagaa
ggtgatggaacacccatcaaggaagacatcctcactgataaactcaatgagaactcaact
ccagagaaaaccgatgtgacaccttccaccacatctccaccttcctatgatagtgtgacc
aagccagaaaaagaaaaatttgagaaagacaaatcagaaaaggaagacaaagggaaagat
atcagggaaagcaaaaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (8)   
   Pfam (8)   
All databases (44)   

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