KEGG   Sus scrofa (pig): 100515330
Entry
100515330         CDS       T01009                                 
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
  KO
K14439  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    100515330 (SMARCAD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100515330 (SMARCAD1)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    100515330 (SMARCAD1)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 CUE ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 100515330
NCBI-ProteinID: XP_005667041
Ensembl: ENSSSCG00000009193
UniProt: A0A4X1UE56 A0A8D0USB8
Position
8:complement(125410221..125488471)
AA seq 1028 aa
MNLFNLDRFRFEKRNKIEEAPEATPQPSRPGPSSPISLSAEEENAEGEVSRAGTPDSDVT
EKTEDSSVPEMPENERKAGISYFKNQRGIQYIDLSSDSEDIISPNCSSTVQEKKFNKDTV
IIVSEPSEDEESQGLPTVAGRNNNDLSELEDLSELEDLKDAKLQTLKELFPQRSDSDLLK
LIESTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPYEEDEFNDDQSIKKKRLDHGEE
SNESAESSSNWEKQESIVLKLQKEFPNFDKEELREVLKEHEWMYTEALESLKVFAEDQDM
QYASPSEFPNGKEVSSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDS
EYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITEL
RPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTG
NGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY
LYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYN
VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPF
ILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTEMCNVMMQL
RKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYR
HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL
RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTIDEGDEGSMPADIAT
LLKTSMGL
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgaatcttttcaacttggaccgctttcgctttgagaaaaggaataagattgaggaagcg
cccgaagcaacacctcaaccctcccggcctggcccttcttcaccgatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaggcacccctgattcagatgtaact
gaaaaaacagaagattctagtgttcctgaaatgccagaaaatgaaagaaaagcaggtata
tcatatttcaagaatcaaagaggaatacagtatattgatttatcttctgatagtgaagat
attatttctccaaattgttccagtacagttcaagagaaaaaattcaacaaagacacagta
attatagtttctgagccatctgaagatgaagagtcccaaggccttcctaccgtggcaggt
agaaataataatgatctgtcagaattggaagacctttcggaattggaagaccttaaagat
gctaaacttcagaccttgaaggaactttttccacaaagaagtgacagtgatttgcttaag
ttgattgaatcaacaagcactatggatggagcaattgctgctgccttgctgatgtttggt
gatgcagaaggtggtgggcctagaaaaagaaaattatcttcttcttcagagccatatgag
gaagatgaatttaatgatgatcaatctataaaaaagaagagactggatcatggagaggaa
tcaaatgagtctgcagaatctagcagtaattgggaaaagcaggaaagtattgtattgaaa
ttgcaaaaggaatttcccaattttgataaagaggaattacgggaagtactcaaggaacat
gaatggatgtacacagaggctttagaatctttaaaagtgtttgcggaagaccaagatatg
cagtatgcttcacccagtgaatttccaaatggaaaagaagtttcttcaagaagtcagaat
taccctaaaaatgcagctaaaacaaaactgaaacagaaatgttccatgaaaccacaaaat
ggttttaacaagaaacgtaaaaaaaatgtctttaatcctaaacgagttattgaagactct
gagtatgattcaggctctgatgtcggtagttccctagatgaggactacagtagtggtgaa
gaagtgatggaggatggctataaaggtaaaattcttcacttccttcaggatgcttccatt
ggtgaacttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactc
cggccctttaatagttgggaagctctgttcacaaagatgtccaaaacgaatggcttatca
gaagatttgatatggcactgtaaaacactgatccaagaaagagatgtcgtcataaggctg
atgaacaaatgcgaagacatttcaaataaattgacaaaacaagttaccatgctcactgga
aatgggggtggatggaacatagagcaaccctctattctaaatcagagtttgtcactcaag
ccctatcagaaggttggtttgaattggctggcattggtacataaacatggacttaatggc
attttggcagatgaaatgggcctaggaaaaactattcaagccattgccttcctggcctac
ctctatcaggagggtaataaaggtcctcatttgatcgttgttccggcatcaactatagat
aactggttaagggaagttaatttatggtgccccactttaaaggtgctctgttactatggt
tctcaagaagaacgtaaacagattagatataatattcatagtaaatacgaagaatacaat
gtaattgtgaccacgtacaattgtgcaatcagcagttccgatgatcgtagtctgtttcgt
cgcttgaaacttaattacgcaatttttgatgagggccatatgctgaagaatatgggctct
atccgctaccagcaccttatgacaattaatgcaaataaccgtttgctgctcacaggcaca
cctgtgcagaataatctcttagaactcatgtcactgttgaattttgttatgccacacatg
tttagtagtagcaccagtgaaatacgaagaatgttttcttctaagacaaaatcagcagat
gagcaaagtatatatgaaaaggagagaatagcacatgcaaaacaaattataaaaccgttt
attctgagaagagtaaaagaagaggttctcaagcagctacctcccaagaaagatcaaatt
gagttgtgtgcaatgtctgagaagcaggagcagctctatttgggtcttttcaacagattg
aaaaaatctatcaataacatggaaaaaaacacagaaatgtgcaatgtcatgatgcaattg
agaaaaatggccaatcaccctttattacatcgtcaatattacacagctgaaaagctcaag
gaaatgtctcagcttatgctgaaggaacccacacactgtgaggctaaccctgacctgatt
tttgaagatatggaggttatgacagactttgaattacatgtactttgcaaacagtatcga
cacattaataacttccagttagacatggacttgattttagattctggaaaattccgagtt
ttaggatgcatattgtcagaattgaaacagaagggtgatagagtcgtattatttagccaa
tttaccatgatgctggatatcttagaggttctcttaaaacatcatcagcataggtacctc
agattagatggaaagactcagatttctgaaagaattcatctaattgacgagtttaatacc
gatatggatatctttgtgtttctgctgtcaacaaaagctggtggcctaggaataaatttg
acctcggcaaatgttgttatacttcatgacattgactgtaatccttacaatgacaaacaa
gcagaggatagatgccatagagtaggccagacaaaagaagtactagttataaaattaata
agccaagggacgattgaagaatccatgctaaaaattaatcaacagaaattgaaactagaa
caagatatgaccacaatagatgaaggtgatgaagggagtatgccagcagatatagccaca
ttactaaaaacgtccatgggcctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system