KEGG   Sus scrofa (pig): 100518073
Entry
100518073         CDS       T01009                                 
Symbol
ARHGEF1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X11
  KO
K12330  Rho guanine nucleotide exchange factor 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04270  Vascular smooth muscle contraction
ssc04611  Platelet activation
ssc04810  Regulation of actin cytoskeleton
ssc04928  Parathyroid hormone synthesis, secretion and action
ssc05135  Yersinia infection
ssc05163  Human cytomegalovirus infection
ssc05200  Pathways in cancer
ssc05205  Proteoglycans in cancer
ssc05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100518073 (ARHGEF1)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    100518073 (ARHGEF1)
  09152 Endocrine system
   04928 Parathyroid hormone synthesis, secretion and action
    100518073 (ARHGEF1)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    100518073 (ARHGEF1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100518073 (ARHGEF1)
   05205 Proteoglycans in cancer
    100518073 (ARHGEF1)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    100518073 (ARHGEF1)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    100518073 (ARHGEF1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100518073 (ARHGEF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100518073 (ARHGEF1)
Membrane trafficking [BR:ssc04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    100518073 (ARHGEF1)
SSDB
Motif
Pfam: RGS-like PH_16 RhoGEF PH_13 Syntaxin_2 AbiJ_NTD3 SET_assoc
Other DBs
NCBI-GeneID: 100518073
NCBI-ProteinID: XP_005655964
Ensembl: ENSSSCG00000003040
Position
6:complement(49975957..49995442)
AA seq 913 aa
MEAEDVARGAAPGPPRPGLVPVSIIGAEDEDFENELKTNPEEQSNQFQSLEQVKQRPAHL
MALLQYVAMQFEPGPLLCCLHADMLGSLGPKEAKKAFIDFYHSFLDKTAVLRVQVPPTVA
FELDRTRPELISEDIQRQFVQEVVQRQQALVSRQLEDFRSKKLMGMTPWEQELTQLGAWV
GRDRASFEARERHLAERQLTHLEEMQHTISPDEEKSAAVVNAISLYMRHLGVRTKSGDKK
SGRNFFRKKVIGNRRSDEPTKAKKGLSSFLDAARWNRTEPQAPDFRHLKVETDAEKPVLT
ERKGGLGVPSRDRNIGAPGQDTPGVSPHPLPGDSPDREPGVDALPELGDPPPQGPVSLEP
PVAAESTEEGADTESPEPGDEGEPGRSGLELEPEEPPGWRELVPLGTLHSLPKSQVKRQE
VISELLVTEAAHVRMLRVLHDLFYQPMAEGGFFLLEELQNIFPSLEELIEVHSLFLDRLM
KRRQDSGYLIEEIGDVLLAQFDGPEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRFCAF
VQEAESQPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEEPAEREKVEQAAECCREIL
HHVNQAVRDMEDLLRLKDYQRRLDLSHLKQSSDPMLSEFKNLDITKKKLVHEGPLTWRVT
KDKAVEVHVLLLDDLLLLLQRQDDRLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVA
TDHKAFYVIFTWDQEAHIYELVAQTVSERKNWCTLITETAGSLKVPAPTSRPKHRPSPSS
SREPLLSSSENGNGGREMPPADGRMERIFTALLPFCRPGPEGQLAAKALQKVLSLKQLLF
PLEEDSRTGPPLEGDGVPGGSPLSPAQIQEIREELLNLEETIKHLEEVEEEFCRLRLLLS
QLGENTVPQPGCT
NT seq 2742 nt   +upstreamnt  +downstreamnt
atggaggcagaagacgtcgcccgaggggcggccccggggcccccccgacccggtctggtg
cctgtcagcatcatcggggcggaggatgaggatttcgagaatgagctcaagacgaaccca
gaggagcaaagcaaccagttccagagcctggagcaggtgaagcagcggccagcccacctc
atggccctcctgcagtatgtggccatgcagttcgagccaggacccctgctctgctgcctg
cacgcggacatgctgggctcactgggccccaaggaggccaagaaggccttcatcgacttc
taccacagcttcctggacaagaccgcggttctgcgggtgcaggtccctcccaccgtggcc
tttgaacttgaccgcacccggcctgaactcatctcggaggacatccagcggcagtttgtg
caggaggtggtgcagaggcagcaggccctcgtcagccggcagctggaggactttcgctcc
aagaagctcatgggcatgacaccctgggagcaggagctgacccagctaggggcctgggtt
ggacgggaccgcgccagctttgaggcccgggagcggcacctggccgagcggcagctgacc
cacctggaggagatgcaacacaccatctctcccgatgaggaaaagagtgccgcggtggtc
aacgccatcagcctgtacatgcgccacctcggggtgcggaccaagagcggggacaagaag
tcggggagaaatttcttccggaaaaaggtgatagggaaccggcggtccgatgagccaacc
aaggccaagaaaggactgagcagcttcctggatgccgcccgctggaaccggacagagccc
caggctccagattttcgacacctcaaagtcgagactgacgctgagaagccagtccttaca
gaacggaagggaggtctaggggtgccctctcgggaccggaatatcggagcccctgggcag
gacacccccggagtttctccgcaccctctgcctggggacagccctgaccgggaaccaggt
gttgatgccctccctgaactgggggacccacccccacagggcccagtcagcctggagccc
ccagtggctgcggagagcaccgaggagggtgctgacacggagagccccgagcctggagat
gagggggagccgggccgatcgggactagagctggaaccagaggaaccgcccggctggcgg
gagctcgtgcccctgggcacactgcacagcctgcccaagagccaggtgaagcggcaggag
gtcatcagtgagctactggtgacggaggcggcccacgtgcgcatgctccgggtgctgcat
gacctcttctaccagcccatggcggaggggggcttctttctcctggaggaactgcagaac
atcttccccagcctggaagagctcatcgaggtgcattccctgttcctggatcgcctgatg
aagcggaggcaggacagtggctacctcattgaggagattggagatgtgctgttggcccag
tttgatggtcccgagggctcctggttccagaaaatctcctcccgcttctgcagccgccag
tcgtttgccttagagcagctcaaagccaaacagcgcaaggagcctcggttctgtgccttt
gttcaggaggccgagagccagccgcggtgccgccgcctgcagctgaaggacatgatcccc
acggagatgcagcgtctgaccaagtacccactgcttctgcagagcatcgggcagaacaca
gaagagccggcggagcgagaaaaagtggagcaggcggcggagtgctgccgggaaattctg
caccatgtcaaccaggccgtgcgtgacatggaggacctgctgcggctcaaggactatcag
aggcggctggatttgtcccacctgaagcagagcagcgaccccatgctgagcgagttcaag
aacctggacatcaccaaaaagaagcttgtccatgagggccccctgacgtggcgggtgacg
aaggacaaagctgtggaggtccacgtgctgctgctggacgacctgctattgctgctccag
cgccaggacgatcggctgctgctcaagtcacacagccggacactgacacccacgcccgac
ggcaagaccatgctgcggccagtgctgcggctcacctctgccatgacccgtgaggtggcc
accgatcacaaagccttctatgtgatttttacctgggaccaggaggcccacatatacgag
ctggtggcacagaccgtgtcagagcggaaaaactggtgtaccctcatcactgaaaccgca
ggatccctgaaggtccctgcccccacctcccgccccaaacaccggcccagccccagcagc
agccgtgaacccctgctcagcagctctgagaatggcaacggcggccgagagatgccccca
gctgacggccggatggagaggatcttcactgccctcctgcccttctgcagaccaggccct
gagggccagcttgccgccaaggcccttcagaaagtgctgtccctgaagcagctcctgttt
cccctggaggaagacagcaggacggggcctcccctcgaaggggatggggtcccaggaggc
agcccccttagcccagcacagattcaggaaattcgggaggagctactcaacctggaggag
accattaaacatctggaggaggtggaggaggagttttgccgcctgagactcctcctgtct
cagctcggggagaacactgtcccccagcctggctgtacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (20)   
   RefSeq(pep) (20)   
DNA sequence (21)   
   RefSeq(nuc) (21)   
Protein domain (7)   
   Pfam (7)   
All databases (80)   

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