KEGG   Sus scrofa (pig): 100518178
Entry
100518178         CDS       T01009                                 
Symbol
FCHO1
Name
(RefSeq) F-BAR domain only protein 1 isoform X1
  KO
K20042  F-BAR domain only protein
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100518178 (FCHO1)
Membrane trafficking [BR:ssc04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    100518178 (FCHO1)
  Bin/Amphiphysin/Rvs (BAR) family proteins
   F-BAR proteins
    100518178 (FCHO1)
SSDB
Motif
Pfam: muHD FCH U1snRNP70_N SAPIS-gp6
Other DBs
NCBI-GeneID: 100518178
NCBI-ProteinID: XP_005654965
Ensembl: ENSSSCG00000013885
Position
2:complement(59958122..59990511)
AA seq 1023 aa
MSYFGEHFWGEKNHGFEVLYQSVKQGPISTKELADFIRERATIEETYSKAMAKLSKLASN
GTPMGTFAPLWEVFRVSSDKLALCHLELTRKLQDLIKDVLRYSDEQLKTHKKCKEEALGT
LDAVQVLAGVSQLLPKSRENYLNRCMDQERLRRESTSQKEMDKAEAKTKKAAESLRRSVE
KYNSARADFEQKMLDSALRFQAMEETHLRQMKALLGSYAHSVEDTHVQIGQVHEEFKQNI
ENVSVEMLLRKFAESKGTGREKPGPLDFEAYSAAALQEAMKRLRGAKAFRLPGLSRRERE
PPAAVDSLEPESGTCPEVDEEGFTVRPDVTQNSTEEPSRFSSSDSDFDDEEPRKFYVHIK
PAPARAPACSPEAAAAQLRATAGSLILPPGPGGTMKRHSSRDTAGKPQRPRSAPRAGSCA
EKPPSDEQVSKNLFGPPLESAFDHEDFTGSSSLGFTSSPSPFSSSSPENVEDSGLDSPSH
VAPGPSPDSWVPRPGTPQSPRTCRAPPPESRGTQPLPPSDSPQPLAPSPGPWGLEAMAGG
DLMPVPADFAAREGLTAPPRRPRSRKVSCPLMRSNGDLSRSLSPSPLGSSAPSTIPERPS
FSSQTGHGVSRGPSPVVLGSQDALPVATAFTEYVHAYFRGHTPSCLARVTGELTMTFPAG
IVRVFSGTPPPPVLSFRLVHTAPIEHFQPNADLLFSDPSQSDPETKDFWLNMAALTEALQ
RQAEQNPAASYYNVMLLRYQFSRPGPQSVPLQLSAHWQCGATLTQVSVEYSYRPGATAVP
TPLTNVQIVLPIGEPVTNVRLQPAATWNLEEKRLLWKLPDVSEAGGSGRLSASWEPCSGP
STPSPVAAQFTSEGATLSGVDLELVGSGYRMSLIKKRFATGMALPCCCAPVEPGPCQVPS
PVPCFCRCVGVGVAFEAFAMNRWVLGPGDPRWRVPVERGAQSPSRKGQVAPRGCPCKNPS
WRARLPNAAQTHSQPILLSPQWDSGNNELQGCFEEDWGIPGWGKGAPFPPHSPTPTGMYL
VSC
NT seq 3072 nt   +upstreamnt  +downstreamnt
atgtcatattttggggagcatttttggggagagaaaaaccatggctttgaggtcctgtac
caaagcgtgaagcaggggcccatctctaccaaggagctggcggacttcattcgagagagg
gccaccattgaggagacctactcgaaggcgatggcaaaactttccaagctggccagcaat
gggacccctatggggaccttcgccccactctgggaggtcttccgagtctcctcagacaag
ctggcgctctgccacctggagctgacacggaagctacaggacctcatcaaggacgtgctt
cgctacagtgacgaacagctcaagacacacaagaagtgcaaagaggaagcgctgggtacc
ctggatgccgtgcaggtccttgcaggcgtcagccagctcctgcccaagtcccgcgagaac
tacctgaatcgttgcatggaccaggagcggctgcggagggagagcaccagccagaaggag
atggacaaggcagaggccaagaccaagaaggcggcagagagcctgcggcgttcagtggag
aaatacaactcagcccgcgctgacttcgaacagaagatgctggactcggctctgcgcttc
caagccatggaggagacccacttgcggcaaatgaaggcacttctgggctcttatgcccac
tcagtggaggacacccatgtgcagattgggcaggtgcatgaggagtttaagcagaacata
gaaaacgtcagtgtggagatgctgctgagaaagtttgcagaaagcaagggcacaggccgg
gagaagcctgggcctttggactttgaggcatacagtgcagctgccctgcaggaagcaatg
aaacgtttgcggggagccaaggcctttcgcctcccaggactgagccggcgggagcgggag
ccacctgcagctgtagattccctggagcccgaatcagggacgtgtccagaggtggatgaa
gaaggtttcactgtccggcctgatgtgacccagaacagcaccgaggagccctcccgcttc
tcatccagcgactccgatttcgatgatgaggagccccgcaaattctacgtgcacatcaag
cctgccccagcccgggccccagcctgcagtccggaggcagctgcagcacagctcagggcc
acagctggcagcctcatcttgcctcctggcccagggggcaccatgaaacgccattcttca
cgagacactgctgggaaaccacagaggcctcgatctgctccaagggctggcagctgtgcc
gagaaaccgccttctgatgagcaggtttccaagaacctctttgggccgccgctagagtct
gcctttgaccacgaagattttacaggctctagcagcctcggcttcacctccagcccctcg
cctttctcctcctcgtcgcctgagaatgtggaggactctggcctggactcaccgtcccac
gtggcgcctggtccctccccggattcctgggtcccccgcccgggcaccccacaaagccca
cgtacctgtagggcgccgcccccggagtcgagggggacacagcccctgccaccatcagac
tcgccgcagccccttgcaccatccccgggcccctgggggctggaggctatggctggagga
gacttgatgcctgtacccgccgactttgcagccagggagggcctgacagccccaccccgg
agaccccgctccaggaaggtgtcctgtcccctcatgcgcagcaacggggacctgtctcgt
tccctcagcccctccccactgggctcttcggcccccagcaccatcccagaacggcccagc
ttctcatcccagacaggacatggagtctcccggggcccaagccctgtggtcctgggctct
caggatgccctgcctgtggccactgccttcactgagtatgtccacgcctactttcgtggc
cacacccccagctgccttgctcgagtaactggggagctgaccatgaccttccctgccggc
atcgtgcgtgtgttcagtggaaccccacccccaccagtcctcagcttccgccttgtgcac
acggcccccattgagcacttccaacccaatgccgacctgctcttcagtgacccctcccag
agtgaccctgagaccaaagacttctggctcaacatggcagctctgactgaggccctgcag
cgccaggcagagcagaatccagctgcctcctactacaatgtaatgctgctgcgataccag
ttctcccgcccgggtccccagtccgtgcctctgcagctgagtgcccactggcagtgcggg
gccaccctcactcaggtctcagtggagtacagctaccggcccggtgccacggccgtgccc
acgccactcaccaatgtccaaatcgtgctgcccattggggagcctgtgaccaatgtccgt
ctgcagccggctgccacctggaacctggaagagaagaggctcctatggaagcttccagat
gtgtccgaggcagggggttctggccgcctatctgccagttgggagccatgttcggggccc
agcacgcccagccctgtagccgctcagttcaccagcgagggggccactctatctggtgtg
gacctggagctggtggggagtggctaccgcatgtccttgataaagaagaggttcgccaca
ggtatggccctgccctgctgctgtgcacccgtggagccaggaccgtgccaggttccgagc
cccgttccctgcttctgccgctgtgtgggggtgggggtggcatttgaggcctttgcaatg
aataggtgggtgttgggacctggagacccaagatggagggtaccggtagagaggggtgct
cagagccccagtcggaagggtcaagtggccccaagagggtgtccctgcaagaacccaagt
tggagagccagactccccaatgctgcacagacccactcccaacccattctcctgtcccca
caatgggacagtgggaacaatgagttacaggggtgtttcgaagaggattgggggatccca
gggtgggggaaaggggcccccttcccccctcacagccccacccccacagggatgtaccta
gtgagctgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (16)   
   RefSeq(pep) (16)   
DNA sequence (19)   
   RefSeq(nuc) (17)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (90)   

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