KEGG   Sus scrofa (pig): 100525573
Entry
100525573         CDS       T01009                                 
Name
(RefSeq) LOW QUALITY PROTEIN: keratin, type II cuticular Hb5-like
  KO
K07605  type II keratin, basic
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssc04812]
    100525573
   04147 Exosome [BR:ssc04147]
    100525573
Cytoskeleton proteins [BR:ssc04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     100525573
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   100525573
  Exosomal proteins of other body fluids (saliva and urine)
   100525573
  Exosomal proteins of colorectal cancer cells
   100525573
  Exosomal proteins of bladder cancer cells
   100525573
SSDB
Motif
Pfam: Filament Keratin_2_head TPR_MLP1_2 NPA Spc7 Mating_N UPF0242 DUF1664 CATRA-C Allexi_40kDa
Other DBs
NCBI-GeneID: 100525573
NCBI-ProteinID: XP_013840061
Ensembl: ENSSSCG00000024474
Position
5:17660220..17673442
AA seq 494 aa
MASRSCHISSGHGVRNFSSCSAVIPKPEAHSFAGGLAFCRGSPGGPGYRRLEGFSSQSLC
ALGSPRIAVSCAWPLCSGGSFGYRAGGLGGPSPPCITTVSIIEGLLTPLNLEIDPNAQCM
KQEEKEQIKCLNNRFAAFIDEVRFLEQQNKLLETKWQFYQNRKCCKSNLELLFNGYIETL
RREAECVEADSGRLASELNHVQEVLEGYKKKYEEEVALKAAAENEFVVLKKDIDCAYLRK
ADLEANVEALKEEMGFLRSLHDEEIYLLQSQISDTSVVVKMDNSRELSMDSVVADIKGQY
DNVASRSQAEAKSWYQTKCEQFKATVTXQDETLRRTKEDIKELTRVIQRLTAEVENTKQQ
RCKLEANVAEAEQQGKAALNDAHCKLADLEAALQKARQDMACLVKEYQEVLNSKLGLHVE
IATYRKLLEGEETRLCEGVGSINICVSHSQGGVVYGGPGSTVPRGLGSMSISSGALCSSS
VVGACSSATSVQFA
NT seq 1485 nt   +upstreamnt  +downstreamnt
atggcgagccgttcctgtcacatcagctccggccatggggtcaggaactttagctcttgc
tcggctgtcatacccaagcctgaggctcacagctttgctggtggcctggccttctgcagg
ggcagtccaggtggccctggctacaggcgtctcgagggcttcagcagccagagcctgtgt
gcactggggtccccacggatcgcagtgagttgtgcatggcctctctgcagcgggggtagc
tttggctaccgggcagggggccttggtggccccagcccgccctgcatcaccactgtgtcc
atcattgagggcctcctcacacccctcaacctggagatcgaccccaatgcccagtgtatg
aagcaggaggagaaggagcagatcaagtgtctcaacaacaggttcgctgccttcattgac
gaggtgcgctttcttgagcagcagaataagctgctggagaccaagtggcagttctaccag
aaccgaaagtgctgcaagagcaacctggagctgctgttcaatggctacattgagacgcta
aggcgggaggccgagtgcgtggaggctgacagcgggaggctggcctccgagctcaaccac
gtgcaggaggtgctggagggctacaagaagaagtatgaagaagaggtggctctcaaggcc
gcagctgagaatgagtttgtggtgctgaagaaggacatcgactgcgcctacctgcgcaag
gctgacctggaggccaacgtggaggcgctgaaggaggagatgggcttcctgcggtccctc
catgatgaggaaatctacctccttcagtcccaaatctctgacacgtcggtggtggtcaag
atggacaacagccgggagctcagcatggactcggtcgtggccgacatcaagggtcagtat
gacaatgtcgccagccgcagccaggctgaggccaagtcctggtaccaaaccaagtgtgag
cagttcaaggccacggtgacatagcaggatgagaccctccgcaggaccaaggaggacatc
aaggagctgacccgtgtgatccagaggctgacggccgaggtggagaacaccaagcagcag
cgctgcaagctggaggccaacgtggccgaggcagagcagcagggcaaggccgccctcaat
gatgcccactgcaagctggcggacctggaggccgccctgcagaaggccaggcaggacatg
gcctgcctggtcaaggagtaccaggaggtgctgaactccaagctgggcctgcatgtggag
atcgctacttaccgcaaactcctggagggcgaggagacacggttgtgtgaaggcgtgggc
tcgatcaacatctgtgtaagccactcccagggtggcgtggtctacgggggtcccggttcc
acggtccctcgtggcctgggcagcatgtccatcagcagtggtgccctctgttcctcctct
gtagtgggggcctgttccagtgcaacatctgtgcagtttgcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system