KEGG   Sus scrofa (pig): 100624116
Entry
100624116         CDS       T01009                                 
Symbol
RPA3
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03030  DNA replication
ssc03420  Nucleotide excision repair
ssc03430  Mismatch repair
ssc03440  Homologous recombination
ssc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100624116 (RPA3)
   03420 Nucleotide excision repair
    100624116 (RPA3)
   03430 Mismatch repair
    100624116 (RPA3)
   03440 Homologous recombination
    100624116 (RPA3)
   03460 Fanconi anemia pathway
    100624116 (RPA3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssc03032]
    100624116 (RPA3)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100624116 (RPA3)
DNA replication proteins [BR:ssc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    100624116 (RPA3)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     100624116 (RPA3)
   MMR (mismatch excision repair)
     100624116 (RPA3)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     100624116 (RPA3)
SSDB
Motif
Pfam: Rep_fac-A_3 DUF356
Other DBs
NCBI-GeneID: 100624116
NCBI-ProteinID: XP_020958082
Ensembl: ENSSSCG00000023886
Position
9:complement(77910876..77914872)
AA seq 121 aa
MVDVMELPKSRINASMVTQFIDQPVCFVGRLEKIHPTGKMFILSDGEGKNVTIELMEPLD
EEISGIVEVVGRVTGKATIMCVSYIQFKEDNHPFDLGLYNEAVKIIHEFPQYFPLGVVQH
G
NT seq 366 nt   +upstreamnt  +downstreamnt
atggtggacgtgatggagttgcccaaatcgcgcatcaacgccagcatggtaactcagttc
atcgaccagccggtctgcttcgtagggaggctggagaagattcatcccactggaaaaatg
tttattctttcagatggagaaggaaaaaatgtaaccattgagttgatggagcctcttgat
gaagaaatctctggaatcgtggaagtggttggaagagtcacaggcaaagcaaccattatg
tgtgtctcttacatccagtttaaagaagataaccatccttttgatcttggactttataat
gaagctgtgaaaattatccatgagttccctcagtattttcctttgggtgttgtgcagcat
ggttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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